RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 EFCAB14O75071 495 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 N4BP1O75113 896 aaKnown RBP7.8□□□□□ -1.16
NUP54-204ENST00000506098 RECQL4O94761 1208 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 AFPP02771 609 aaKnown RBP7.8□□□□□ -1.16
NUP54-204ENST00000506098 ITGA4P13612 1032 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 KCNE1P15382 129 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 CSF2RAP15509 400 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 CDC25BP30305 580 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 FMO5P49326 533 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 ZNF75DP51815 510 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 YARSP54577 528 aaKnown RBP7.8□□□□□ -1.16
NUP54-204ENST00000506098 OSTNP61366 133 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 PPP3CAQ08209 521 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 PPIGQ13427 754 aaKnown RBP eCLIP7.8□□□□□ -1.16
NUP54-204ENST00000506098 IKBKEQ14164 716 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 ZACNQ401N2 412 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 TCERG1LQ5VWI1 586 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 AGMOQ6ZNB7 445 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 DEFB128Q7Z7B8 93 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 CREBRFQ8IUR6 639 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 HACE1Q8IYU2 909 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 C7orf61Q8IZ16 206 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 RSPH1Q8WYR4 309 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 MRFAP1L1Q96HT8 127 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 ERGIC2Q96RQ1 377 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 FNBP1Q96RU3 617 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 PLCD4Q9BRC7 762 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 TRIM5Q9C035 493 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 XPO4Q9C0E2 1151 aaKnown RBP7.8□□□□□ -1.16
NUP54-204ENST00000506098 TMEM117Q9H0C3 514 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 TMEM8AQ9HCN3 771 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 PRDM5Q9NQX1 630 aaPredicted RBP7.8□□□□□ -1.16
NUP54-204ENST00000506098 INTS13Q9NVM9 706 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 TMEM161AQ9NX61 479 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 TAB2Q9NYJ8 693 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 PRKAG2Q9UGJ0 569 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 C2CD2Q9Y426 696 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 HES2Q9Y543 173 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 PATJQ8NI35 1801 aa7.8□□□□□ -1.16
NUP54-204ENST00000506098 TNRC18O15417 2968 aaPredicted RBP7.8□□□□□ -1.16
NUP54-204ENST00000506098 PTPRJQ12913 1337 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 RBAK-RBAKDNI3L0D1 243 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 BAIAP3O94812 1187 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 TPM3P06753 285 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 TRIM49P0CI25 452 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 TRIM49CP0CI26 452 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 TNNI1P19237 187 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 CYP3A5P20815 502 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 AKAP5P24588 427 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 FPGSQ05932 587 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 KCNMA1Q12791 1236 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 NAB2Q15742 525 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 DUOXA2Q1HG44 320 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 CBWD6Q4V339 395 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 EPC2Q52LR7 807 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 DCAF17Q5H9S7 520 aaPredicted RBP7.79□□□□□ -1.16
NUP54-204ENST00000506098 CBWD3Q5JTY5 395 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 CBWD5Q5RIA9 395 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 FKBP15Q5T1M5 1219 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 KRT39Q6A163 491 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 JADE1Q6IE81 842 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 DPY19L2P1Q6NXN4 242 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 SV2AQ7L0J3 742 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 C16orf59Q7L2K0 433 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.79□□□□□ -1.16
NUP54-204ENST00000506098 EFCAB13Q8IY85 973 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 GSTCDQ8NEC7 633 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 LMO3Q8TAP4 145 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 CXorf38Q8TB03 319 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 CACTINQ8WUQ7 758 aaKnown RBP7.79□□□□□ -1.16
NUP54-204ENST00000506098 BADQ92934 168 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 CCDC127Q96BQ5 260 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 ANKRD36BP1Q96IX9 119 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 ZMAT2Q96NC0 199 aaKnown RBP7.79□□□□□ -1.16
NUP54-204ENST00000506098 PPP1R10Q96QC0 940 aaKnown RBP7.79□□□□□ -1.16
NUP54-204ENST00000506098 POP1Q99575 1024 aaKnown RBP7.79□□□□□ -1.16
NUP54-204ENST00000506098 CXCL16Q9H2A7 254 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 RSAD1Q9HA92 442 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 RNF19AQ9NV58 838 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 MIOSQ9NXC5 875 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 PARP2Q9UGN5 583 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 SIK3Q9Y2K2 1263 aa7.79□□□□□ -1.16
NUP54-204ENST00000506098 ITIH6Q6UXX5 1313 aa7.78□□□□□ -1.16
NUP54-204ENST00000506098 SMIM28A0A1B0GU29 152 aa7.78□□□□□ -1.16
NUP54-204ENST00000506098 ARL5CA6NH57 179 aa7.78□□□□□ -1.16
NUP54-204ENST00000506098 MEIS3P2A8K0S8 358 aa7.78□□□□□ -1.16
NUP54-204ENST00000506098 PTGESO14684 152 aa7.78□□□□□ -1.16
NUP54-204ENST00000506098 XPOTO43592 962 aaKnown RBP7.78□□□□□ -1.16
NUP54-204ENST00000506098 OFD1O75665 1012 aa7.78□□□□□ -1.16
NUP54-204ENST00000506098 VNN1O95497 513 aa7.78□□□□□ -1.16
NUP54-204ENST00000506098 ADCY5O95622 1261 aa7.78□□□□□ -1.16
NUP54-204ENST00000506098 TNNC2P02585 160 aa7.78□□□□□ -1.16
NUP54-204ENST00000506098 DLATP10515 647 aaKnown RBP7.78□□□□□ -1.16
NUP54-204ENST00000506098 ACTN1P12814 892 aa7.78□□□□□ -1.16
NUP54-204ENST00000506098 GCLMP48507 274 aa7.78□□□□□ -1.16
NUP54-204ENST00000506098 MXI1P50539 228 aa7.78□□□□□ -1.16
NUP54-204ENST00000506098 UBXN1Q04323 297 aa7.78□□□□□ -1.16
NUP54-204ENST00000506098 TMEM132DQ14C87 1099 aa7.78□□□□□ -1.16
NUP54-204ENST00000506098 CLLU1OSQ5K130 101 aa7.78□□□□□ -1.16
NUP54-204ENST00000506098 TMEM240Q5SV17 173 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms