RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 KIF4AO95239 1232 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 CLTAP09496 248 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 NDUFA8P51970 172 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 RBM10P98175 930 aaKnown RBP12.45□□□□□ -0.42
KDM3B-203ENST00000505756 DSG1Q02413 1049 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 ALCAMQ13740 583 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 SMAD2Q15796 467 aaKnown RBP12.45□□□□□ -0.42
KDM3B-203ENST00000505756 USP41Q3LFD5 358 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 HERC4Q5GLZ8 1057 aaPredicted RBP12.45□□□□□ -0.42
KDM3B-203ENST00000505756 CCDC183Q5T5S1 534 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 KIAA1841Q6NSI8 718 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 ANKRD54Q6NXT1 300 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 TAS1R1Q7RTX1 841 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 PPFIBP1Q86W92 1011 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 CCDC65Q8IXS2 484 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 GPR65Q8IYL9 337 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 RABGGTAQ92696 567 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 STAMQ92783 540 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 NECAB3Q96P71 396 aaPredicted RBP12.45□□□□□ -0.42
KDM3B-203ENST00000505756 STRA6Q9BX79 667 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 GPR62Q9BZJ7 368 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 TRIM9Q9C026 710 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 PLEKHA5Q9HAU0 1116 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 PANK4Q9NVE7 773 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 TMEM63CQ9P1W3 806 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 CACNG4Q9UBN1 327 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 USP25Q9UHP3 1055 aa12.45□□□□□ -0.42
KDM3B-203ENST00000505756 BRWD1Q9NSI6 2320 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 TNFRSF10AO00220 468 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 C2CD2LO14523 706 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 OGTO15294 1046 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 MEFVO15553 781 aaPredicted RBP12.44□□□□□ -0.42
KDM3B-203ENST00000505756 FAM189A1O60320 539 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 GCNT3O95395 438 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 CNPP09543 421 aaKnown RBP12.44□□□□□ -0.42
KDM3B-203ENST00000505756 HOXB8P17481 243 aaPredicted RBP12.44□□□□□ -0.42
KDM3B-203ENST00000505756 CLCNKBP51801 687 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 ELAVL2Q12926 359 aaKnown RBP12.44□□□□□ -0.42
KDM3B-203ENST00000505756 UPP1Q16831 310 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 SLC10A6Q3KNW5 377 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 SEZ6Q53EL9 994 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 L1TD1Q5T7N2 865 aaKnown RBP12.44□□□□□ -0.42
KDM3B-203ENST00000505756 KIAA0319Q5VV43 1072 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 SLFN12LQ6IEE8 588 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 CNNM4Q6P4Q7 775 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 SLC39A4Q6P5W5 647 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 DCLRE1AQ6PJP8 1040 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 HASPINQ8TF76 798 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 DDX27Q96GQ7 796 aaKnown RBP12.44□□□□□ -0.42
KDM3B-203ENST00000505756 ZMAT2Q96NC0 199 aaKnown RBP12.44□□□□□ -0.42
KDM3B-203ENST00000505756 KLHL5Q96PQ7 755 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 MSTO1Q9BUK6 570 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 CLSTN2Q9H4D0 955 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.44□□□□□ -0.42
KDM3B-203ENST00000505756 DZANK1Q9NVP4 752 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 TBC1D7Q9P0N9 293 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 PRKAG3Q9UGI9 489 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 KCNH3Q9ULD8 1083 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 EXOC7Q9UPT5 735 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 PCDHB13Q9Y5F0 798 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.44□□□□□ -0.42
KDM3B-203ENST00000505756 STYXL1Q9Y6J8 313 aa12.44□□□□□ -0.42
KDM3B-203ENST00000505756 A0A1B0GVL5 298 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 TTC26A0AVF1 554 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 B3GAT3O94766 335 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 ADH1AP07327 375 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 CXCL8P10145 99 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 KLRC2P26717 231 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 TNFSF9P41273 254 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 SYKP43405 635 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 CLCN4P51793 760 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 CREMQ03060 361 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 PPP2R3AQ06190 1150 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 SOX4Q06945 474 aaPredicted RBP12.43□□□□□ -0.42
KDM3B-203ENST00000505756 TPRNQ4KMQ1 711 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 SYCE2Q6PIF2 218 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 STXBP4Q6ZWJ1 553 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 CEP57L1Q8IYX8 460 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 SLC22A17Q8WUG5 538 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 ACCSQ96QU6 501 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 TSPAN18Q96SJ8 248 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 C7orf25Q9BPX7 421 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 GOLGA2P5Q9HBQ8 144 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 RXFP1Q9HBX9 757 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 CPSF3Q9UKF6 684 aaKnown RBP12.43□□□□□ -0.42
KDM3B-203ENST00000505756 MUC3AQ02505 3323 aa12.43□□□□□ -0.42
KDM3B-203ENST00000505756 TCF20Q9UGU0 1960 aaKnown RBP12.43□□□□□ -0.42
KDM3B-203ENST00000505756 ANKRD63C9JTQ0 380 aa12.42□□□□□ -0.42
KDM3B-203ENST00000505756 PODXLO00592 558 aa12.42□□□□□ -0.42
KDM3B-203ENST00000505756 TEX28O15482 410 aa12.42□□□□□ -0.42
KDM3B-203ENST00000505756 TRAPPC3O43617 180 aa12.42□□□□□ -0.42
KDM3B-203ENST00000505756 ACTN4O43707 911 aaKnown RBP12.42□□□□□ -0.42
KDM3B-203ENST00000505756 KINO60870 393 aaKnown RBP12.42□□□□□ -0.42
KDM3B-203ENST00000505756 ZNF202O95125 648 aa12.42□□□□□ -0.42
KDM3B-203ENST00000505756 C1RP00736 705 aa12.42□□□□□ -0.42
KDM3B-203ENST00000505756 ADRB2P07550 413 aa12.42□□□□□ -0.42
KDM3B-203ENST00000505756 MYBP10242 640 aa12.42□□□□□ -0.42
KDM3B-203ENST00000505756 EPCAMP16422 314 aa12.42□□□□□ -0.42
KDM3B-203ENST00000505756 RPL9P32969 192 aaKnown RBP12.42□□□□□ -0.42
KDM3B-203ENST00000505756 CASP5P51878 434 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms