RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 GRASPQ7Z6J2 395 aaPredicted RBP7.89□□□□□ -1.15
VCAN-206ENST00000505615 PALB2Q86YC2 1186 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 ABCA7Q8IZY2 2146 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 ITFG1Q8TB96 612 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 FOXD4L4Q8WXT5 416 aaPredicted RBP7.89□□□□□ -1.15
VCAN-206ENST00000505615 RRP36Q96EU6 259 aaKnown RBP7.89□□□□□ -1.15
VCAN-206ENST00000505615 PGBD1Q96JS3 809 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 MBOAT7Q96N66 472 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 IER2Q9BTL4 223 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 DSCC1Q9BVC3 393 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 PHF20Q9BVI0 1012 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 LSM14BQ9BX40 385 aaKnown RBP7.89□□□□□ -1.15
VCAN-206ENST00000505615 GZF1Q9H116 711 aaPredicted RBP7.89□□□□□ -1.15
VCAN-206ENST00000505615 CHST12Q9NRB3 414 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 HEBP1Q9NRV9 189 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 FBXW11Q9UKB1 542 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 FAN1Q9Y2M0 1017 aa7.89□□□□□ -1.15
VCAN-206ENST00000505615 CNTNAP5Q8WYK1 1306 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 CHURC1-FNTBB4DL54 471 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 GAS2O43903 313 aaKnown RBP7.88□□□□□ -1.15
VCAN-206ENST00000505615 ZNF862O60290 1169 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 PLEKHA8P1O95397 391 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 TOP3BO95985 862 aaKnown RBP7.88□□□□□ -1.15
VCAN-206ENST00000505615 RHOQP17081 205 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 SDSP20132 328 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 SPINK2P20155 84 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 GPC1P35052 558 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 FNTBP49356 437 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 RAB27AP51159 221 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 CCR3P51677 355 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 HNRNPUQ00839 825 aaKnown RBP eCLIP7.88□□□□□ -1.15
VCAN-206ENST00000505615 SATB1Q01826 763 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 DRP2Q13474 957 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 CCDC6Q16204 474 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 SOWAHCQ53LP3 525 aaPredicted RBP7.88□□□□□ -1.15
VCAN-206ENST00000505615 STPG1Q5TH74 334 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 PSAPL1Q6NUJ1 521 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 MIS18BP1Q6P0N0 1132 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 ZNF852Q6ZMS4 543 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 TRMT1LQ7Z2T5 733 aaKnown RBP7.88□□□□□ -1.15
VCAN-206ENST00000505615 PRICKLE2Q7Z3G6 844 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 SRBD1Q8N5C6 995 aaKnown RBP7.88□□□□□ -1.15
VCAN-206ENST00000505615 CCDC97Q96F63 343 aaPredicted RBP7.88□□□□□ -1.15
VCAN-206ENST00000505615 B3GALT6Q96L58 329 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 PLA2G2FQ9BZM2 168 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 IL25Q9H293 177 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 CHST7Q9NS84 486 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 FNIP2Q9P278 1114 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 CEP131Q9UPN4 1083 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 PIN4Q9Y237 131 aaKnown RBP7.88□□□□□ -1.15
VCAN-206ENST00000505615 SSX2IPQ9Y2D8 614 aa7.88□□□□□ -1.15
VCAN-206ENST00000505615 PRG3Q9Y2Y8 225 aaPredicted RBP7.88□□□□□ -1.15
VCAN-206ENST00000505615 K7ESF4 209 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 IFIT3O14879 490 aaKnown RBP7.87□□□□□ -1.15
VCAN-206ENST00000505615 GIPC1O14908 333 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 ECI2O75521 394 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 PAPSS2O95340 614 aaPredicted RBP7.87□□□□□ -1.15
VCAN-206ENST00000505615 ALDH2P05091 517 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 ZNF806P0C7X5 589 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 SKIP12755 728 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 RPL17P18621 184 aaKnown RBP7.87□□□□□ -1.15
VCAN-206ENST00000505615 TMOD1P28289 359 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 SMARCA1P28370 1054 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 HOXC13P31276 330 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 KIF5BP33176 963 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 ANTXR2P58335 489 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 DSC1Q08554 894 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 DBN1Q16643 649 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 NIPA1Q7RTP0 329 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 MRPL10Q7Z7H8 261 aaKnown RBP7.87□□□□□ -1.15
VCAN-206ENST00000505615 GLYCTKQ8IVS8 523 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 CKAP2LQ8IYA6 745 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 COLGALT2Q8IYK4 626 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 GPR65Q8IYL9 337 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 URGCPQ8TCY9 931 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 ZCCHC14Q8WYQ9 949 aaKnown RBP7.87□□□□□ -1.15
VCAN-206ENST00000505615 DNASE1L2Q92874 299 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 ACDQ96AP0 544 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 SCLT1Q96NL6 688 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 MAP3K14Q99558 947 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 FAM117AQ9C073 453 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 RSAD1Q9HA92 442 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 CYLDQ9NQC7 956 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 SEC63Q9UGP8 760 aaKnown RBP7.87□□□□□ -1.15
VCAN-206ENST00000505615 NDRG2Q9UN36 371 aaKnown RBP7.87□□□□□ -1.15
VCAN-206ENST00000505615 MRPS17Q9Y2R5 130 aaKnown RBP7.87□□□□□ -1.15
VCAN-206ENST00000505615 PCDHB2Q9Y5E7 798 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 TAF6LQ9Y6J9 622 aa7.87□□□□□ -1.15
VCAN-206ENST00000505615 KIF26AQ9ULI4 1882 aaPredicted RBP7.87□□□□□ -1.15
VCAN-206ENST00000505615 KALRNO60229 2985 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 CNTNAP2Q9UHC6 1331 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 IGLV3-22A0A075B6J6 115 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 A0A087WZ62 844 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 hCG_1642624A0A1W2PR95 340 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 FAM86B1E9PN63 330 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 EPN2O95208 641 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 POMCP01189 267 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 HNRNPA1P09651 372 aaKnown RBP eCLIP7.86□□□□□ -1.15
VCAN-206ENST00000505615 FAM86B2P0C5J1 330 aa7.86□□□□□ -1.15
VCAN-206ENST00000505615 SFPQP23246 707 aaKnown RBP eCLIP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms