RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 CYP46A1Q9Y6A2 500 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 TDRD15B5MCY1 1934 aaKnown RBP10.94□□□□□ -0.66
NEDD9-210ENST00000505589 MIA3Q5JRA6 1907 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 ARHGEF37A1IGU5 675 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 CASTOR2A6NHX0 329 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 LRRIQ4A6NIV6 560 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 ACKR2O00590 384 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 PRRG1O14668 218 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 RHOP08100 348 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 PSMC3P17980 439 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 FGFR3P22607 806 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 TGM1P22735 817 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 GLRA2P23416 452 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 NTHL1P78549 312 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 CYP4A11Q02928 519 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 DMWDQ09019 674 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 MTAPQ13126 283 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 PRPF4BQ13523 1007 aaKnown RBP10.93□□□□□ -0.66
NEDD9-210ENST00000505589 SIM2Q14190 667 aaPredicted RBP10.93□□□□□ -0.66
NEDD9-210ENST00000505589 LRRC32Q14392 662 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 PPP2R5AQ15172 486 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 CSRP2Q16527 193 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 DCAF4L1Q3SXM0 396 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 IL31Q6EBC2 164 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 PDZD4Q76G19 769 aaPredicted RBP10.93□□□□□ -0.66
NEDD9-210ENST00000505589 FAM3CQ92520 227 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 HAS1Q92839 578 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 FZD8Q9H461 694 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 LMAN1LQ9HAT1 526 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 XPNPEP1Q9NQW7 623 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 SLC38A7Q9NVC3 462 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 SNTG2Q9NY99 539 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 WRAP73Q9P2S5 460 aaPredicted RBP10.93□□□□□ -0.66
NEDD9-210ENST00000505589 CDY1Q9Y6F8 540 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 CACNA1BQ00975 2339 aa10.93□□□□□ -0.66
NEDD9-210ENST00000505589 PHLPP2Q6ZVD8 1323 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 F8W810 466 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 ZNF263O14978 683 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 KIF4AO95239 1232 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 CPA1P15085 419 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 ATF2P15336 505 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 ATP2B1P20020 1258 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 RARRES1P49788 294 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 YARSP54577 528 aaKnown RBP10.92□□□□□ -0.66
NEDD9-210ENST00000505589 SPEM2Q0P670 501 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 FZD5Q13467 585 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 PPM1JQ5JR12 505 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 TPGS2Q68CL5 300 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 TANGO2Q6ICL3 276 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 PRR23BQ6ZRT6 265 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 PIK3AP1Q6ZUJ8 805 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 LONP2Q86WA8 852 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 SPEM1Q8N4L4 309 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 CSGALNACT1Q8TDX6 532 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 HASPINQ8TF76 798 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 NACC1Q96RE7 527 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 OXCT2Q9BYC2 517 aaPredicted RBP10.92□□□□□ -0.66
NEDD9-210ENST00000505589 C8orf33Q9H7E9 229 aaPredicted RBP10.92□□□□□ -0.66
NEDD9-210ENST00000505589 NCOA5Q9HCD5 579 aaKnown RBP10.92□□□□□ -0.66
NEDD9-210ENST00000505589 ZNF334Q9HCZ1 680 aaPredicted RBP10.92□□□□□ -0.66
NEDD9-210ENST00000505589 TOPORSQ9NS56 1045 aaPredicted RBP10.92□□□□□ -0.66
NEDD9-210ENST00000505589 SEMA4GQ9NTN9 838 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 KCNG1Q9UIX4 513 aa10.92□□□□□ -0.66
NEDD9-210ENST00000505589 NDRG2Q9UN36 371 aaKnown RBP10.92□□□□□ -0.66
NEDD9-210ENST00000505589 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.91□□□□□ -0.66
NEDD9-210ENST00000505589 SYN3O14994 580 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 ZBTB39O15060 712 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 ABLIM3O94929 683 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 EFNA5P52803 228 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 PTPAQ15257 358 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 CALCRLQ16602 461 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 DGKKQ5KSL6 1271 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 SLC8B1Q6J4K2 584 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 TSSK4Q6SA08 328 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 MFSD6LQ8IWD5 586 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 YAF2Q8IY57 180 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 TCEAL8Q8IYN2 117 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 SYNPOQ8N3V7 929 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 ST13P5Q8NFI4 369 aaPredicted RBP10.91□□□□□ -0.66
NEDD9-210ENST00000505589 FAM200AQ8TCP9 573 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 ASAP3Q8TDY4 903 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 SMARCD2Q92925 531 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 LOXL4Q96JB6 756 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 IFT74Q96LB3 600 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 PAAF1Q9BRP4 392 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 TM6SF1Q9BZW5 370 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 POLR3FQ9H1D9 316 aaPredicted RBP10.91□□□□□ -0.66
NEDD9-210ENST00000505589 TTC12Q9H892 705 aaPredicted RBP10.91□□□□□ -0.66
NEDD9-210ENST00000505589 ZSWIM6Q9HCJ5 1215 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 ANGPTL2Q9UKU9 493 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.91□□□□□ -0.66
NEDD9-210ENST00000505589 FRYLO94915 3013 aa10.91□□□□□ -0.66
NEDD9-210ENST00000505589 B4GALT5O43286 388 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 RECQL4O94761 1208 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 PAPSS2O95340 614 aaPredicted RBP10.9□□□□□ -0.66
NEDD9-210ENST00000505589 MUTP22033 750 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 GDI1P31150 447 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 RPL9P32969 192 aaKnown RBP10.9□□□□□ -0.66
NEDD9-210ENST00000505589 NAMPTP43490 491 aa10.9□□□□□ -0.66
NEDD9-210ENST00000505589 LIMK1P53667 647 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms