RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 SIT1Q9Y3P8 196 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 CACNA1IQ9P0X4 2223 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 COL4A2P08572 1712 aa6.47□□□□□ -1.37
GYPB-205ENST00000505583 SF3B1O75533 1304 aaKnown RBP eCLIP6.47□□□□□ -1.372e-6■■■■■ 43.1
GYPB-205ENST00000505583 PTPRZ1P23471 2315 aaPredicted RBP6.47□□□□□ -1.37
GYPB-205ENST00000505583 DNAH14Q0VDD8 3507 aa6.46□□□□□ -1.37
GYPB-205ENST00000505583 ZMYM2Q9UBW7 1377 aa6.46□□□□□ -1.37
GYPB-205ENST00000505583 GVINP1Q7Z2Y8 2422 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 MED19A0JLT2 244 aaPredicted RBP6.46□□□□□ -1.38
GYPB-205ENST00000505583 SHISA7A6NL88 538 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 MEFVO15553 781 aaPredicted RBP6.46□□□□□ -1.38
GYPB-205ENST00000505583 C1RP00736 705 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 THP07101 528 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 XRCC6P12956 609 aaKnown RBP eCLIP6.46□□□□□ -1.38
GYPB-205ENST00000505583 FGFR3P22607 806 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 OR1D2P34982 312 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 BRCC3P46736 316 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 CLCNKBP51801 687 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 STARD6P59095 220 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 SOX4Q06945 474 aaPredicted RBP6.46□□□□□ -1.38
GYPB-205ENST00000505583 PRPF4BQ13523 1007 aaKnown RBP6.46□□□□□ -1.38
GYPB-205ENST00000505583 PDCD11Q14690 1871 aaKnown RBP6.46□□□□□ -1.38
GYPB-205ENST00000505583 FAM187BQ17R55 369 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 SLC5A9Q2M3M2 681 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 PPM1LQ5SGD2 360 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 AXDND1Q5T1B0 1012 aaPredicted RBP6.46□□□□□ -1.38
GYPB-205ENST00000505583 NT5DC1Q5TFE4 455 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 PHLDB3Q6NSJ2 640 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 ELMSAN1Q6PJG2 1045 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 PADI6Q6TGC4 694 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 C1orf210Q8IVY1 113 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 NPAS3Q8IXF0 933 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 KIAA2013Q8IYS2 634 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 HACE1Q8IYU2 909 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 TMEM130Q8N3G9 435 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 CEP120Q8N960 986 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 PJA1Q8NG27 643 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 SLC7A14Q8TBB6 771 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 KCNG4Q8TDN1 519 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 ING5Q8WYH8 240 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 NXPE3Q969Y0 559 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 PRIMPOLQ96LW4 560 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 CCDC43Q96MW1 224 aaKnown RBP6.46□□□□□ -1.38
GYPB-205ENST00000505583 ARID3AQ99856 593 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 KXD1Q9BQD3 176 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 DDX23Q9BUQ8 820 aaKnown RBP6.46□□□□□ -1.38
GYPB-205ENST00000505583 PLA2G2FQ9BZM2 168 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 GOLGA2P5Q9HBQ8 144 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 PRMT7Q9NVM4 692 aaPredicted RBP6.46□□□□□ -1.38
GYPB-205ENST00000505583 DNMT3BQ9UBC3 853 aaKnown RBP6.46□□□□□ -1.38
GYPB-205ENST00000505583 DPP7Q9UHL4 492 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 CDH7Q9ULB5 785 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 POLIQ9UNA4 740 aa6.46□□□□□ -1.38
GYPB-205ENST00000505583 ZNF292O60281 2723 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 TICRRQ7Z2Z1 1910 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 ACKR2O00590 384 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 N4BP3O15049 544 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 LMNAP02545 664 aaKnown RBP6.45□□□□□ -1.38
GYPB-205ENST00000505583 PRKCBP05771 671 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 HNRNPA1P09651 372 aaKnown RBP eCLIP6.45□□□□□ -1.38
GYPB-205ENST00000505583 CYP11B2P19099 503 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 RFX1P22670 979 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 FECHP22830 423 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 TKTP29401 623 aaKnown RBP6.45□□□□□ -1.38
GYPB-205ENST00000505583 RAB33AQ14088 237 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 ZNF174Q15697 407 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 MAPK6Q16659 721 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 UPP1Q16831 310 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 ERMP1Q7Z2K6 904 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 ZBTB8OSQ8IWT0 167 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 PARP9Q8IXQ6 854 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 C4orf32Q8N8J7 132 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 SUMF1Q8NBK3 374 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 MCPH1Q8NEM0 835 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 WASF1Q92558 559 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 PCMTD1Q96MG8 357 aaPredicted RBP6.45□□□□□ -1.38
GYPB-205ENST00000505583 ZMAT2Q96NC0 199 aaKnown RBP6.45□□□□□ -1.38
GYPB-205ENST00000505583 PPP1R10Q96QC0 940 aaKnown RBP6.45□□□□□ -1.38
GYPB-205ENST00000505583 NACC1Q96RE7 527 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 POLR3CQ9BUI4 534 aaPredicted RBP6.45□□□□□ -1.38
GYPB-205ENST00000505583 BRMS1Q9HCU9 246 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 TUFT1Q9NNX1 390 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 MTRRQ9UBK8 725 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 CDY1Q9Y6F8 540 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 CITO14578 2027 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 ANK1P16157 1881 aa6.45□□□□□ -1.38
GYPB-205ENST00000505583 DMXL1Q9Y485 3027 aa6.44□□□□□ -1.38
GYPB-205ENST00000505583 SMIM28A0A1B0GU29 152 aa6.44□□□□□ -1.38
GYPB-205ENST00000505583 KANSL1LA0AUZ9 987 aa6.44□□□□□ -1.38
GYPB-205ENST00000505583 WDR27A2RRH5 827 aa6.44□□□□□ -1.38
GYPB-205ENST00000505583 ARHGEF35A5YM69 484 aa6.44□□□□□ -1.38
GYPB-205ENST00000505583 PP2D1A8MPX8 630 aa6.44□□□□□ -1.38
GYPB-205ENST00000505583 TMEM189-UBE2V1I3L0A0 370 aa6.44□□□□□ -1.38
GYPB-205ENST00000505583 B3GAT3O94766 335 aa6.44□□□□□ -1.38
GYPB-205ENST00000505583 SEC24AO95486 1093 aa6.44□□□□□ -1.38
GYPB-205ENST00000505583 CEBPBP17676 345 aa6.44□□□□□ -1.38
GYPB-205ENST00000505583 RPA1P27694 616 aa6.44□□□□□ -1.38
GYPB-205ENST00000505583 HOXA9P31269 272 aa6.44□□□□□ -1.38
GYPB-205ENST00000505583 CCR2P41597 374 aa6.44□□□□□ -1.38
GYPB-205ENST00000505583 NAMPTP43490 491 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms