RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 RNF169Q8NCN4 708 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 ZSWIM2Q8NEG5 633 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 PARD3BQ8TEW8 1205 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 CACTINQ8WUQ7 758 aaKnown RBP11.12□□□□□ -0.63
RFC1-210ENST00000505077 SLC35C1Q96A29 364 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 CGRRF1Q99675 332 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 GDF15Q99988 308 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 MFRPQ9BY79 579 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 HSD3B7Q9H2F3 369 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 SAMSN1Q9NSI8 373 aaKnown RBP11.12□□□□□ -0.63
RFC1-210ENST00000505077 PARP2Q9UGN5 583 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 UBQLN1Q9UMX0 589 aaKnown RBP11.12□□□□□ -0.63
RFC1-210ENST00000505077 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.12□□□□□ -0.63
RFC1-210ENST00000505077 SLC4A7Q9Y6M7 1214 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 TRANK1O15050 2925 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 PLXNA4Q9HCM2 1894 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 MYH10P35580 1976 aa11.12□□□□□ -0.63
RFC1-210ENST00000505077 GTPBP10A4D1E9 387 aaKnown RBP11.11□□□□□ -0.63
RFC1-210ENST00000505077 ZBBXA8MT70 800 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 H0YGN5 161 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 PMM2O15305 246 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 P4HA2O15460 535 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 DGKIO75912 1065 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 GJB5O95377 273 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 CDK11BP21127 795 aaKnown RBP11.11□□□□□ -0.63
RFC1-210ENST00000505077 AKAP5P24588 427 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 MTIF2P46199 727 aaKnown RBP11.11□□□□□ -0.63
RFC1-210ENST00000505077 EPHB4P54760 987 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 MLLT1Q03111 559 aaPredicted RBP11.11□□□□□ -0.63
RFC1-210ENST00000505077 CETN1Q12798 172 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 DUOXA2Q1HG44 320 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 SEZ6Q53EL9 994 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 NOMO2Q5JPE7 1267 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 CLLU1OSQ5K130 101 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 CMTR2Q8IYT2 770 aaKnown RBP11.11□□□□□ -0.63
RFC1-210ENST00000505077 RDH13Q8NBN7 331 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 LPPQ93052 612 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 CCDC127Q96BQ5 260 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 EEF2KMTQ96G04 330 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 ANKRD36BP1Q96IX9 119 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 RNPC3Q96LT9 517 aaKnown RBP11.11□□□□□ -0.63
RFC1-210ENST00000505077 UROC1Q96N76 676 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 PPP1R10Q96QC0 940 aaKnown RBP11.11□□□□□ -0.63
RFC1-210ENST00000505077 GAD1Q99259 594 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 TUBGCP2Q9BSJ2 902 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 APOL6Q9BWW8 343 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 PDE11AQ9HCR9 933 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 INTS13Q9NVM9 706 aa11.11□□□□□ -0.63
RFC1-210ENST00000505077 LIMA1Q9UHB6 759 aaKnown RBP11.11□□□□□ -0.63
RFC1-210ENST00000505077 LAMA3Q16787 3333 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 ATG2AQ2TAZ0 1938 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 SMIM28A0A1B0GU29 152 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 LRRC10BA6NIK2 292 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 LRRIQ3A6PVS8 624 aaPredicted RBP11.1□□□□□ -0.63
RFC1-210ENST00000505077 LACTBL1A8MY62 500 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 PTGESO14684 152 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 MEFVO15553 781 aaPredicted RBP11.1□□□□□ -0.63
RFC1-210ENST00000505077 OFD1O75665 1012 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 TNNC2P02585 160 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 AFPP02771 609 aaKnown RBP11.1□□□□□ -0.63
RFC1-210ENST00000505077 TPM3P06753 285 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 THP07101 528 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 TMEM191BP0C7N4 346 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 DLATP10515 647 aaKnown RBP11.1□□□□□ -0.63
RFC1-210ENST00000505077 ATP2A2P16615 1042 aaKnown RBP11.1□□□□□ -0.63
RFC1-210ENST00000505077 TNNI1P19237 187 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 PAX3P23760 479 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 MXI1P50539 228 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 DEFB103AP81534 67 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 KRT31Q15323 416 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 ZBTB6Q15916 424 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 UVSSAQ2YD98 709 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 DCAF17Q5H9S7 520 aaPredicted RBP11.1□□□□□ -0.63
RFC1-210ENST00000505077 TCERG1LQ5VWI1 586 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 JADE1Q6IE81 842 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.1□□□□□ -0.63
RFC1-210ENST00000505077 RNF214Q8ND24 703 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 GSTCDQ8NEC7 633 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 BEST2Q8NFU1 509 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 HELQQ8TDG4 1101 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 KIF12Q96FN5 646 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 ZFP42Q96MM3 310 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 UBE2OQ9C0C9 1292 aaKnown RBP11.1□□□□□ -0.63
RFC1-210ENST00000505077 RC3H2Q9HBD1 1191 aaKnown RBP11.1□□□□□ -0.63
RFC1-210ENST00000505077 TMEM8AQ9HCN3 771 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 RNF19AQ9NV58 838 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 ITGA11Q9UKX5 1188 aa11.1□□□□□ -0.63
RFC1-210ENST00000505077 COL4A4P53420 1690 aaPredicted RBP11.09□□□□□ -0.63
RFC1-210ENST00000505077 MEIS3P2A8K0S8 358 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 NFICP08651 508 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 FGFR1P11362 822 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 SCNN1GP51170 649 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 HTRA4P83105 476 aaPredicted RBP11.09□□□□□ -0.63
RFC1-210ENST00000505077 RNASELQ05823 741 aaKnown RBP11.09□□□□□ -0.63
RFC1-210ENST00000505077 TUSC3Q13454 348 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 NAB2Q15742 525 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 ZACNQ401N2 412 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 FILIP1LQ4L180 1135 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 VWA3BQ502W6 1294 aa11.09□□□□□ -0.63
RFC1-210ENST00000505077 KRT39Q6A163 491 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms