RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 POU5F1BQ06416 359 aa17.69■□□□□ 0.42
PDLIM7-213ENST00000505074 ADCY1Q08828 1119 aa17.69■□□□□ 0.42
PDLIM7-213ENST00000505074 MTAPQ13126 283 aa17.69■□□□□ 0.42
PDLIM7-213ENST00000505074 ZNF174Q15697 407 aa17.69■□□□□ 0.42
PDLIM7-213ENST00000505074 ZBTB8OSQ8IWT0 167 aa17.69■□□□□ 0.42
PDLIM7-213ENST00000505074 TUFT1Q9NNX1 390 aa17.69■□□□□ 0.42
PDLIM7-213ENST00000505074 MIOSQ9NXC5 875 aa17.69■□□□□ 0.42
PDLIM7-213ENST00000505074 PARP2Q9UGN5 583 aa17.69■□□□□ 0.42
PDLIM7-213ENST00000505074 ADAM28Q9UKQ2 775 aa17.69■□□□□ 0.42
PDLIM7-213ENST00000505074 ANGPTL2Q9UKU9 493 aa17.69■□□□□ 0.42
PDLIM7-213ENST00000505074 POLIQ9UNA4 740 aa17.69■□□□□ 0.42
PDLIM7-213ENST00000505074 MED24O75448 989 aa17.68■□□□□ 0.42
PDLIM7-213ENST00000505074 OR52Z1P0C646 297 aa17.68■□□□□ 0.42
PDLIM7-213ENST00000505074 LIG1P18858 919 aa17.68■□□□□ 0.42
PDLIM7-213ENST00000505074 AKAP5P24588 427 aa17.68■□□□□ 0.42
PDLIM7-213ENST00000505074 HOXA9P31269 272 aa17.68■□□□□ 0.42
PDLIM7-213ENST00000505074 AMHR2Q16671 573 aa17.68■□□□□ 0.42
PDLIM7-213ENST00000505074 SLC27A1Q6PCB7 646 aa17.68■□□□□ 0.42
PDLIM7-213ENST00000505074 CATSPER3Q86XQ3 398 aa17.68■□□□□ 0.42
PDLIM7-213ENST00000505074 IFNLR1Q8IU57 520 aaPredicted RBP17.68■□□□□ 0.42
PDLIM7-213ENST00000505074 MCPH1Q8NEM0 835 aa17.68■□□□□ 0.42
PDLIM7-213ENST00000505074 ITFG1Q8TB96 612 aa17.68■□□□□ 0.42
PDLIM7-213ENST00000505074 NACC1Q96RE7 527 aa17.68■□□□□ 0.42
PDLIM7-213ENST00000505074 SEMA4GQ9NTN9 838 aa17.68■□□□□ 0.42
PDLIM7-213ENST00000505074 KLK14Q9P0G3 267 aa17.68■□□□□ 0.42
PDLIM7-213ENST00000505074 RALYQ9UKM9 306 aaKnown RBP17.68■□□□□ 0.42
PDLIM7-213ENST00000505074 GIT1Q9Y2X7 761 aa17.68■□□□□ 0.42
PDLIM7-213ENST00000505074 NOTCH4Q99466 2003 aa17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 ARHGEF35A5YM69 484 aa17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 CCL16O15467 120 aa17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 TADA2AO75478 443 aa17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 C8AP07357 584 aa17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 SPATA31C1P0DKV0 1188 aa17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 XRCC6P12956 609 aaKnown RBP eCLIP17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 FZD5Q13467 585 aa17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 TTC38Q5R3I4 469 aa17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 PRSS55Q6UWB4 352 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 PRR23CQ6ZRP0 262 aa17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 PRR23BQ6ZRT6 265 aa17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 LLPHQ9BRT6 129 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 NFKBIZQ9BYH8 718 aa17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 HEBP1Q9NRV9 189 aa17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 PRMT7Q9NVM4 692 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 NOL7Q9UMY1 257 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-213ENST00000505074 FOXD2O60548 495 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-213ENST00000505074 HMGN5P82970 282 aaKnown RBP17.66■□□□□ 0.42
PDLIM7-213ENST00000505074 COL9A2Q14055 689 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-213ENST00000505074 CSRP2Q16527 193 aa17.66■□□□□ 0.42
PDLIM7-213ENST00000505074 HAUS3Q68CZ6 603 aa17.66■□□□□ 0.42
PDLIM7-213ENST00000505074 IER2Q9BTL4 223 aa17.66■□□□□ 0.42
PDLIM7-213ENST00000505074 FOXP1Q9H334 677 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-213ENST00000505074 KCNH3Q9ULD8 1083 aa17.66■□□□□ 0.42
PDLIM7-213ENST00000505074 SF3B1O75533 1304 aaKnown RBP eCLIP17.66■□□□□ 0.424e-7■■■■■ 44.1
PDLIM7-213ENST00000505074 ECI2O75521 394 aa17.65■□□□□ 0.42
PDLIM7-213ENST00000505074 TDGF1P13385 188 aa17.65■□□□□ 0.42
PDLIM7-213ENST00000505074 RBM25P49756 843 aaKnown RBP17.65■□□□□ 0.42
PDLIM7-213ENST00000505074 RTP2Q5QGT7 225 aa17.65■□□□□ 0.42
PDLIM7-213ENST00000505074 PADI6Q6TGC4 694 aa17.65■□□□□ 0.42
PDLIM7-213ENST00000505074 MAMSTRQ6ZN01 415 aa17.65■□□□□ 0.42
PDLIM7-213ENST00000505074 NPAS3Q8IXF0 933 aa17.65■□□□□ 0.42
PDLIM7-213ENST00000505074 DEPTORQ8TB45 409 aa17.65■□□□□ 0.42
PDLIM7-213ENST00000505074 RABGGTAQ92696 567 aa17.65■□□□□ 0.42
PDLIM7-213ENST00000505074 ZSCAN31Q96LW9 406 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-213ENST00000505074 CLSTN3Q9BQT9 956 aa17.65■□□□□ 0.42
PDLIM7-213ENST00000505074 POLR3CQ9BUI4 534 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-213ENST00000505074 C2orf40Q9H1Z8 148 aa17.65■□□□□ 0.42
PDLIM7-213ENST00000505074 CHRDQ9H2X0 955 aa17.65■□□□□ 0.42
PDLIM7-213ENST00000505074 NDRG2Q9UN36 371 aaKnown RBP17.65■□□□□ 0.42
PDLIM7-213ENST00000505074 A0A1B0GUA9 196 aa17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 MAN2B1O00754 1011 aa17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 N4BP3O15049 544 aa17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 RPA1P27694 616 aa17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 CCT6AP40227 531 aaKnown RBP17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 CCR3P51677 355 aa17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 GRIK3Q13003 919 aa17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 ORC2Q13416 577 aaPredicted RBP17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 PRPF4BQ13523 1007 aaKnown RBP17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 SIM2Q14190 667 aaPredicted RBP17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 MAPK6Q16659 721 aa17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 PABPC1LQ4VXU2 614 aaKnown RBP17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 IL31Q6EBC2 164 aa17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 NOSTRINQ8IVI9 506 aa17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 DNASE1L2Q92874 299 aa17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 PRIMPOLQ96LW4 560 aa17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 ADPGKQ9BRR6 497 aa17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 SH2B1Q9NRF2 756 aaPredicted RBP17.64■□□□□ 0.41
PDLIM7-213ENST00000505074 GDF9O60383 454 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 PRKCBP05771 671 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 POU2F2P09086 479 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 PMLP29590 882 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 NBR1Q14596 966 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 PSMD5Q16401 504 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 UVSSAQ2YD98 709 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 CDCA2Q69YH5 1023 aaPredicted RBP17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 CEP57Q86XR8 500 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 FBXO18Q8NFZ0 1043 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 SLC7A14Q8TBB6 771 aa17.63■□□□□ 0.41
PDLIM7-213ENST00000505074 HASPINQ8TF76 798 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms