RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 RWDD3Q9Y3V2 267 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 INSL6Q9Y581 213 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 MRPL42Q9Y6G3 142 aaKnown RBP9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 LINC01553A4QN01 128 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 PSMA7O14818 248 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 POU2F2P09086 479 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 EEF1GP26641 437 aaKnown RBP9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 PPP2R3AQ06190 1150 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 BFSP1Q12934 665 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 NOMO2Q5JPE7 1267 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 CAVIN1Q6NZI2 390 aaKnown RBP9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 INTS8Q75QN2 995 aaKnown RBP9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 LRRC52Q8N7C0 313 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 COLGALT1Q8NBJ5 622 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 ZNF668Q96K58 619 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 ACAP3Q96P50 834 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 NAA15Q9BXJ9 866 aaKnown RBP9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 BCO2Q9BYV7 579 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 RHOBTB2Q9BYZ6 727 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 NRDE2Q9H7Z3 1164 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 INTS13Q9NVM9 706 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 CEP72Q9P209 647 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 ITGA11Q9UKX5 1188 aa9.01□□□□□ -0.97
CDC42SE2-208ENST00000505065 MYCNP04198 464 aaPredicted RBP9□□□□□ -0.97
CDC42SE2-208ENST00000505065 RB1P06400 928 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 ITGA4P13612 1032 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 ZSCAN20P17040 1043 aaPredicted RBP9□□□□□ -0.97
CDC42SE2-208ENST00000505065 TAP1Q03518 808 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 UBE3AQ05086 875 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 SCARA3Q6AZY7 606 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 SARM1Q6SZW1 724 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 DEFB128Q7Z7B8 93 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 PBX4Q9BYU1 374 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 HSFX4A0A1B0GTS1 333 aaPredicted RBP9□□□□□ -0.97
CDC42SE2-208ENST00000505065 HSFX3A0A1B0GWH4 333 aaPredicted RBP9□□□□□ -0.97
CDC42SE2-208ENST00000505065 CAMK1Q14012 370 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 OLIG1Q8TAK6 271 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 PPP1R16BQ96T49 567 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 SIX2Q9NPC8 291 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 LMCD1Q9NZU5 365 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 CTNND2Q9UQB3 1225 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 SPTBN5Q9NRC6 3674 aaKnown RBP9□□□□□ -0.97
CDC42SE2-208ENST00000505065 CXCL8P10145 99 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 FGFR3P22607 806 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 PSMC2P35998 433 aaKnown RBP9□□□□□ -0.97
CDC42SE2-208ENST00000505065 NCBP1Q09161 790 aaKnown RBP9□□□□□ -0.97
CDC42SE2-208ENST00000505065 TUSC3Q13454 348 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 JADE1Q6IE81 842 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 C1orf127Q8N9H9 656 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 ADPGKQ9BRR6 497 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 PCDHB7Q9Y5E2 793 aa9□□□□□ -0.97
CDC42SE2-208ENST00000505065 LAMA2P24043 3122 aaKnown RBP9□□□□□ -0.97
CDC42SE2-208ENST00000505065 FSD2A1L4K1 749 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 FGFR1P11362 822 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 ATP2A2P16615 1042 aaKnown RBP8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 DLG4P78352 724 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 ARMCX5Q6P1M9 558 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 TAF4BQ92750 862 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 LMAN2LQ9H0V9 348 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 METTL14Q9HCE5 456 aaKnown RBP8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 SLC4A7Q9Y6M7 1214 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 LCHNA4D1U4 455 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 ZNF233A6NK53 670 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 GABRDO14764 452 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 NFICP08651 508 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 NR2F2P24468 414 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 RPL13P26373 211 aaKnown RBP8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 ATICP31939 592 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 TDRD10Q5VZ19 366 aaKnown RBP8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 C9orf57Q5W0N0 161 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 C3orf58Q8NDZ4 430 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 BEST2Q8NFU1 509 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 LBHD1Q9BQE6 289 aaPredicted RBP8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 RXFP1Q9HBX9 757 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 SLC38A7Q9NVC3 462 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 ZC3H11AO75152 810 aaKnown RBP eCLIP8.99□□□□□ -0.973e-8■■■□□ 18.7
CDC42SE2-208ENST00000505065 PPP3CAQ08209 521 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 RAB30Q15771 203 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 TCP11X2Q5H9J9 407 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 DDX53Q86TM3 631 aaKnown RBP8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 LPPQ93052 612 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 JAKMIP2Q96AA8 810 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 CCDC94Q9BW85 323 aaPredicted RBP8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 TTYH3Q9C0H2 523 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 TMEM8AQ9HCN3 771 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 RBAKQ9NYW8 714 aaPredicted RBP8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 HES2Q9Y543 173 aa8.99□□□□□ -0.97
CDC42SE2-208ENST00000505065 GALTP07902 379 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 CCDC192P0DO97 292 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 MLH1P40692 756 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 GATMP50440 423 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 INCA1Q0VD86 236 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 TWF2Q6IBS0 349 aaKnown RBP8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 ZNF280BQ86YH2 543 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 POMGNT1Q8WZA1 660 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 TOPORSQ9NS56 1045 aaPredicted RBP8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 PCDH10Q9P2E7 1040 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 UBQLN1Q9UMX0 589 aaKnown RBP8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 NME7Q9Y5B8 376 aa8.98□□□□□ -0.97
CDC42SE2-208ENST00000505065 RANBP2P49792 3224 aaKnown RBP8.98□□□□□ -0.97
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