RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.14□□□□□ -0.79
TPM3-218ENST00000505010 TRANK1O15050 2925 aa10.14□□□□□ -0.79
TPM3-218ENST00000505010 WDFY4Q6ZS81 3184 aa10.14□□□□□ -0.79
TPM3-218ENST00000505010 TRIP11Q15643 1979 aa10.14□□□□□ -0.79
TPM3-218ENST00000505010 ZBBXA8MT70 800 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 PRR33A8MZF0 331 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 MFAP3LO75121 409 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 MCF2P10911 925 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 ATP2A2P16615 1042 aaKnown RBP10.13□□□□□ -0.79
TPM3-218ENST00000505010 EIF4BP23588 611 aaKnown RBP10.13□□□□□ -0.79
TPM3-218ENST00000505010 CASP14P31944 242 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 TNFSF9P41273 254 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 GCLMP48507 274 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 MXI1P50539 228 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 ADKP55263 362 aaKnown RBP10.13□□□□□ -0.79
TPM3-218ENST00000505010 CCL23P55773 120 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 OSTNP61366 133 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 NCBP1Q09161 790 aaKnown RBP10.13□□□□□ -0.79
TPM3-218ENST00000505010 KCNMA1Q12791 1236 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 LRMPQ12912 555 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 PTK7Q13308 1070 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 PSMD6Q15008 389 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 PCBP1Q15365 356 aaKnown RBP eCLIP10.13□□□□□ -0.79
TPM3-218ENST00000505010 EXOC3L4Q17RC7 722 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 DCAF4L1Q3SXM0 396 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 CBWD6Q4V339 395 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 HS1BP3Q53T59 392 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 CBWD3Q5JTY5 395 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 CBWD5Q5RIA9 395 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 C1orf220Q5T0J3 134 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 CRELD2Q6UXH1 353 aaPredicted RBP10.13□□□□□ -0.79
TPM3-218ENST00000505010 APBB1IPQ7Z5R6 666 aaPredicted RBP10.13□□□□□ -0.79
TPM3-218ENST00000505010 CNGA4Q8IV77 575 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 BRSK2Q8IWQ3 736 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 THNSL1Q8IYQ7 743 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 TMC2Q8TDI7 906 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 CACTINQ8WUQ7 758 aaKnown RBP10.13□□□□□ -0.79
TPM3-218ENST00000505010 TMEM40Q8WWA1 233 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 FNBP1Q96RU3 617 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 ADPGKQ9BRR6 497 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 KCNF1Q9H3M0 494 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 CERS4Q9HA82 394 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 PTPRHQ9HD43 1115 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 AGPAT5Q9NUQ2 364 aa10.13□□□□□ -0.79
TPM3-218ENST00000505010 PIN4Q9Y237 131 aaKnown RBP10.13□□□□□ -0.79
TPM3-218ENST00000505010 GTPBP10A4D1E9 387 aaKnown RBP10.12□□□□□ -0.79
TPM3-218ENST00000505010 NRDCO43847 1150 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 FAM189A1O60320 539 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 B4GALT4O60513 344 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 NPTXRO95502 500 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 TNNI1P19237 187 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 WNT7BP56706 349 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 ENPEPQ07075 957 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 PPP3CAQ08209 521 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 CETN1Q12798 172 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 LMBRD2Q68DH5 695 aaPredicted RBP10.12□□□□□ -0.79
TPM3-218ENST00000505010 NOTUMQ6P988 496 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 CACNA2D4Q7Z3S7 1137 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 LRRC8AQ8IWT6 810 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 CEP120Q8N960 986 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 TC2NQ8N9U0 490 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 PARD3BQ8TEW8 1205 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 DHX38Q92620 1227 aaKnown RBP10.12□□□□□ -0.79
TPM3-218ENST00000505010 IQCDQ96DY2 449 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 FAM212AQ96EL1 285 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 POP1Q99575 1024 aaKnown RBP10.12□□□□□ -0.79
TPM3-218ENST00000505010 CGRRF1Q99675 332 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 INTS2Q9H0H0 1204 aaKnown RBP10.12□□□□□ -0.79
TPM3-218ENST00000505010 TRPV6Q9H1D0 765 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 PDE11AQ9HCR9 933 aa10.12□□□□□ -0.79
TPM3-218ENST00000505010 NOC2LQ9Y3T9 749 aaKnown RBP10.12□□□□□ -0.79
TPM3-218ENST00000505010 UMODL1Q5DID0 1318 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 GBF1Q92538 1859 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 A0A1B0GUA9 196 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 A0A1W2PQJ5 194 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 TTC26A0AVF1 554 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 EPHB6O15197 1021 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 RPS6KA5O75582 802 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 CLSTN1O94985 981 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 CHRNA1P02708 482 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 CA3P07451 260 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 STAG3L1P0CL83 205 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 CXCL8P10145 99 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 ACTN1P12814 892 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 SLC9A1P19634 815 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 PON1P27169 355 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 AXLP30530 894 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 GTF2H1P32780 548 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 KRT9P35527 623 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 CCZ1BP86790 482 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 CCZ1P86791 482 aaPredicted RBP10.11□□□□□ -0.79
TPM3-218ENST00000505010 APBA1Q02410 837 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 MGAT3Q09327 533 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 BIRC3Q13489 604 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 SURF1Q15526 300 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 ENOX2Q16206 610 aaKnown RBP10.11□□□□□ -0.79
TPM3-218ENST00000505010 KYAT1Q16773 422 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 TRIM71Q2Q1W2 868 aaKnown RBP10.11□□□□□ -0.79
TPM3-218ENST00000505010 FIGNQ5HY92 759 aa10.11□□□□□ -0.79
TPM3-218ENST00000505010 KRT39Q6A163 491 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms