RNA–Protein interactions for RNA: ENST00000504824.5

SDHA-205, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-205ENST00000504824 HASPINQ8TF76 798 aa18.91■□□□□ 0.62
SDHA-205ENST00000504824 LARP4BQ92615 738 aaKnown RBP18.91■□□□□ 0.62
SDHA-205ENST00000504824 ACAP3Q96P50 834 aa18.91■□□□□ 0.62
SDHA-205ENST00000504824 PPP1R10Q96QC0 940 aaKnown RBP18.91■□□□□ 0.62
SDHA-205ENST00000504824 USP28Q96RU2 1077 aa18.91■□□□□ 0.62
SDHA-205ENST00000504824 PARVGQ9HBI0 331 aa18.91■□□□□ 0.62
SDHA-205ENST00000504824 SMIM28A0A1B0GU29 152 aa18.91■□□□□ 0.62
SDHA-205ENST00000504824 KIF4AO95239 1232 aa18.91■□□□□ 0.62
SDHA-205ENST00000504824 HSP90AA1P07900 732 aaKnown RBP18.91■□□□□ 0.62
SDHA-205ENST00000504824 HARSP12081 509 aaKnown RBP18.91■□□□□ 0.62
SDHA-205ENST00000504824 XKR4Q5GH76 650 aa18.91■□□□□ 0.62
SDHA-205ENST00000504824 GPR65Q8IYL9 337 aa18.91■□□□□ 0.62
SDHA-205ENST00000504824 RIN2Q8WYP3 895 aaPredicted RBP18.91■□□□□ 0.62
SDHA-205ENST00000504824 ZHX3Q9H4I2 956 aa18.91■□□□□ 0.62
SDHA-205ENST00000504824 PIDD1Q9HB75 910 aa18.91■□□□□ 0.62
SDHA-205ENST00000504824 CCDC195A0A1B0GUA6 201 aa18.9■□□□□ 0.62
SDHA-205ENST00000504824 CLDN3O15551 220 aa18.9■□□□□ 0.62
SDHA-205ENST00000504824 GBP2P32456 591 aaPredicted RBP18.9■□□□□ 0.62
SDHA-205ENST00000504824 TXLNAP40222 546 aa18.9■□□□□ 0.62
SDHA-205ENST00000504824 ZNF131P52739 623 aa18.9■□□□□ 0.62
SDHA-205ENST00000504824 TDGQ13569 410 aa18.9■□□□□ 0.62
SDHA-205ENST00000504824 FAM171A1Q5VUB5 890 aa18.9■□□□□ 0.62
SDHA-205ENST00000504824 RRAGBQ5VZM2 374 aa18.9■□□□□ 0.62
SDHA-205ENST00000504824 DCLRE1AQ6PJP8 1040 aa18.9■□□□□ 0.62
SDHA-205ENST00000504824 KRI1Q8N9T8 703 aaKnown RBP18.9■□□□□ 0.62
SDHA-205ENST00000504824 HDAC7Q8WUI4 952 aa18.9■□□□□ 0.62
SDHA-205ENST00000504824 FNIP2Q9P278 1114 aa18.9■□□□□ 0.62
SDHA-205ENST00000504824 ANKFY1Q9P2R3 1169 aa18.9■□□□□ 0.62
SDHA-205ENST00000504824 FBXL21Q9UKT6 434 aa18.9■□□□□ 0.62
SDHA-205ENST00000504824 MORC2Q9Y6X9 1032 aaPredicted RBP18.9■□□□□ 0.62
SDHA-205ENST00000504824 TRAK2O60296 914 aa18.89■□□□□ 0.61
SDHA-205ENST00000504824 TBCAO75347 108 aaKnown RBP18.89■□□□□ 0.61
SDHA-205ENST00000504824 SCP2P22307 547 aa18.89■□□□□ 0.61
SDHA-205ENST00000504824 MATR3P43243 847 aaKnown RBP eCLIP18.89■□□□□ 0.61
SDHA-205ENST00000504824 CLCNKBP51801 687 aa18.89■□□□□ 0.61
SDHA-205ENST00000504824 ELAVL2Q12926 359 aaKnown RBP18.89■□□□□ 0.61
SDHA-205ENST00000504824 CEP57Q86XR8 500 aa18.89■□□□□ 0.61
SDHA-205ENST00000504824 PALB2Q86YC2 1186 aa18.89■□□□□ 0.61
SDHA-205ENST00000504824 SMG7Q92540 1137 aaKnown RBP18.89■□□□□ 0.61
SDHA-205ENST00000504824 KCNN1Q92952 543 aa18.89■□□□□ 0.61
SDHA-205ENST00000504824 BICD1Q96G01 975 aa18.89■□□□□ 0.61
SDHA-205ENST00000504824 UROC1Q96N76 676 aa18.89■□□□□ 0.61
SDHA-205ENST00000504824 TTPALQ9BTX7 342 aa18.89■□□□□ 0.61
SDHA-205ENST00000504824 SMOC2Q9H3U7 446 aa18.89■□□□□ 0.61
SDHA-205ENST00000504824 PLEKHA4Q9H4M7 779 aa18.89■□□□□ 0.61
SDHA-205ENST00000504824 FAM86C1Q9NVL1 165 aa18.89■□□□□ 0.61
SDHA-205ENST00000504824 IGSF9Q9P2J2 1179 aa18.89■□□□□ 0.61
SDHA-205ENST00000504824 STK17AQ9UEE5 414 aa18.89■□□□□ 0.61
SDHA-205ENST00000504824 TBX20Q9UMR3 447 aa18.89■□□□□ 0.61
SDHA-205ENST00000504824 TRIP11Q15643 1979 aa18.88■□□□□ 0.61
SDHA-205ENST00000504824 C2orf16Q68DN1 1984 aa18.88■□□□□ 0.61
SDHA-205ENST00000504824 CLUHO75153 1309 aa18.88■□□□□ 0.61
SDHA-205ENST00000504824 K7ENM7 598 aa18.88■□□□□ 0.61
SDHA-205ENST00000504824 GALR2O43603 387 aaPredicted RBP18.88■□□□□ 0.61
SDHA-205ENST00000504824 B3GAT3O94766 335 aa18.88■□□□□ 0.61
SDHA-205ENST00000504824 PDIA4P13667 645 aaKnown RBP18.88■□□□□ 0.61
SDHA-205ENST00000504824 NASPP49321 788 aaPredicted RBP18.88■□□□□ 0.61
SDHA-205ENST00000504824 MCL1Q07820 350 aa18.88■□□□□ 0.61
SDHA-205ENST00000504824 NOLC1Q14978 699 aaKnown RBP eCLIP18.88■□□□□ 0.613e-6■□□□□ 10.3
SDHA-205ENST00000504824 STK38Q15208 465 aa18.88■□□□□ 0.61
SDHA-205ENST00000504824 UPP1Q16831 310 aa18.88■□□□□ 0.61
SDHA-205ENST00000504824 SEZ6Q53EL9 994 aa18.88■□□□□ 0.61
SDHA-205ENST00000504824 RTP2Q5QGT7 225 aa18.88■□□□□ 0.61
SDHA-205ENST00000504824 ASTLQ6HA08 431 aaPredicted RBP18.88■□□□□ 0.61
SDHA-205ENST00000504824 GLYCTKQ8IVS8 523 aa18.88■□□□□ 0.61
SDHA-205ENST00000504824 FLCNQ8NFG4 579 aa18.88■□□□□ 0.61
SDHA-205ENST00000504824 SNX27Q96L92 541 aa18.88■□□□□ 0.61
SDHA-205ENST00000504824 ZNF396Q96N95 335 aaPredicted RBP18.88■□□□□ 0.61
SDHA-205ENST00000504824 ZMAT2Q96NC0 199 aaKnown RBP18.88■□□□□ 0.61
SDHA-205ENST00000504824 PHOX2BQ99453 314 aa18.88■□□□□ 0.61
SDHA-205ENST00000504824 RHOBTB2Q9BYZ6 727 aa18.88■□□□□ 0.61
SDHA-205ENST00000504824 SLC38A7Q9NVC3 462 aa18.88■□□□□ 0.61
SDHA-205ENST00000504824 TFIP11Q9UBB9 837 aaKnown RBP18.88■□□□□ 0.61
SDHA-205ENST00000504824 PLXNA3P51805 1871 aa18.87■□□□□ 0.61
SDHA-205ENST00000504824 TMEM189-UBE2V1I3L0A0 370 aa18.87■□□□□ 0.61
SDHA-205ENST00000504824 C1RP00736 705 aa18.87■□□□□ 0.61
SDHA-205ENST00000504824 SPATA31D3P0C874 917 aa18.87■□□□□ 0.61
SDHA-205ENST00000504824 MYBP10242 640 aa18.87■□□□□ 0.61
SDHA-205ENST00000504824 KCNE1P15382 129 aa18.87■□□□□ 0.61
SDHA-205ENST00000504824 RPL17P18621 184 aaKnown RBP18.87■□□□□ 0.61
SDHA-205ENST00000504824 RFX1P22670 979 aa18.87■□□□□ 0.61
SDHA-205ENST00000504824 LIG4P49917 911 aa18.87■□□□□ 0.61
SDHA-205ENST00000504824 PRSS55Q6UWB4 352 aaPredicted RBP18.87■□□□□ 0.61
SDHA-205ENST00000504824 SPATA31D4Q6ZUB0 917 aa18.87■□□□□ 0.61
SDHA-205ENST00000504824 SV2BQ7L1I2 683 aa18.87■□□□□ 0.61
SDHA-205ENST00000504824 LINC00301Q8NCQ3 95 aa18.87■□□□□ 0.61
SDHA-205ENST00000504824 DDX27Q96GQ7 796 aaKnown RBP18.87■□□□□ 0.61
SDHA-205ENST00000504824 PANK2Q9BZ23 570 aa18.87■□□□□ 0.61
SDHA-205ENST00000504824 KCNK12Q9HB15 430 aa18.87■□□□□ 0.61
SDHA-205ENST00000504824 GOLGA2P5Q9HBQ8 144 aa18.87■□□□□ 0.61
SDHA-205ENST00000504824 WDR6Q9NNW5 1121 aaKnown RBP18.87■□□□□ 0.61
SDHA-205ENST00000504824 CNTN3Q9P232 1028 aa18.87■□□□□ 0.61
SDHA-205ENST00000504824 H0Y858 1186 aa18.86■□□□□ 0.61
SDHA-205ENST00000504824 TGM5O43548 720 aa18.86■□□□□ 0.61
SDHA-205ENST00000504824 IGFBP6P24592 240 aaPredicted RBP18.86■□□□□ 0.61
SDHA-205ENST00000504824 CLCN5P51795 746 aa18.86■□□□□ 0.61
SDHA-205ENST00000504824 SOX4Q06945 474 aaPredicted RBP18.86■□□□□ 0.61
SDHA-205ENST00000504824 SLC10A6Q3KNW5 377 aa18.86■□□□□ 0.61
SDHA-205ENST00000504824 FOXD4L5Q5VV16 416 aaPredicted RBP18.86■□□□□ 0.61
SDHA-205ENST00000504824 CCDC73Q6ZRK6 1079 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms