RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 CREB3O43889 395 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 TFRCP02786 760 aaKnown RBP14.98□□□□□ -0.01
TCOF1-207ENST00000504761 MMEP08473 750 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 PRAMEF19Q5SWL8 479 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 NIPA1Q7RTP0 329 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 SLC20A1Q8WUM9 679 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 TATDN2Q93075 761 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 MCEEQ96PE7 176 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 NIF3L1Q9GZT8 377 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 RBM12Q9NTZ6 932 aaKnown RBP14.98□□□□□ -0.01
TCOF1-207ENST00000504761 PARVAQ9NVD7 372 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 NOVA2Q9UNW9 492 aaKnown RBP14.98□□□□□ -0.01
TCOF1-207ENST00000504761 LPXNO60711 386 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 COMTP21964 271 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 SETDB1Q15047 1291 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 CCDC137Q6PK04 289 aaKnown RBP14.98□□□□□ -0.01
TCOF1-207ENST00000504761 TRIM72Q6ZMU5 477 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 HPDLQ96IR7 371 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 RBM41Q96IZ5 413 aaKnown RBP14.98□□□□□ -0.01
TCOF1-207ENST00000504761 FAM84AQ96KN4 292 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 ASNSD1Q9NWL6 643 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 LRP6O75581 1613 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 ANKRD63C9JTQ0 380 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 NNTQ13423 1086 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 UGCGQ16739 394 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 RGS2P41220 211 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 PTGER2P43116 358 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 EMBQ6PCB8 327 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 ARHGEF18Q6ZSZ5 1173 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 KATNAL1Q9BW62 490 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 ZMYND15Q9H091 742 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 COL20A1Q9P218 1284 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 IP6K2Q9UHH9 426 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 FNDC3AQ9Y2H6 1198 aaKnown RBP14.97□□□□□ -0.01
TCOF1-207ENST00000504761 EPHB6O15197 1021 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 KIAA1755Q5JYT7 1200 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 CYP4A22Q5TCH4 519 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 ZC3H18Q86VM9 953 aaKnown RBP14.97□□□□□ -0.01
TCOF1-207ENST00000504761 RIOX2Q8IUF8 465 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 WHAMMQ8TF30 809 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 DHX35Q9H5Z1 703 aaKnown RBP14.97□□□□□ -0.01
TCOF1-207ENST00000504761 A0A0U1RQJ8 604 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 NDC80O14777 642 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 P4HA2O15460 535 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 CLTAP09496 248 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 CDH6P55285 790 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 SMAD1Q15797 465 aaKnown RBP14.97□□□□□ -0.01
TCOF1-207ENST00000504761 ZSCAN26Q16670 478 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 CBWD6Q4V339 395 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 ARSHQ5FYA8 562 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 FIGNQ5HY92 759 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 CBWD3Q5JTY5 395 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 CBWD5Q5RIA9 395 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 FAM117BQ6P1L5 589 aa14.97□□□□□ -0.01
TCOF1-207ENST00000504761 UPP2O95045 317 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 CXCL8P10145 99 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 GBP1P32455 592 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 KCNJ1P48048 391 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 CYP24A1Q07973 514 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 CACNB2Q08289 660 aaPredicted RBP14.96□□□□□ -0.01
TCOF1-207ENST00000504761 SYCP2LQ5T4T6 812 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 SLC47A2Q86VL8 602 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 SIK2Q9H0K1 926 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 WNT8AQ9H1J5 351 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 OSGEPQ9NPF4 335 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 C5P01031 1676 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 RRN3P2A6NIE6 340 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 LRRC10BA6NIK2 292 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 F8VZ95 297 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 SLC4A1P02730 911 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 PDGFRAP16234 1089 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 GARTP22102 1010 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 MYL6P60660 151 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 PPIL2Q13356 520 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 CUL2Q13617 745 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 C1orf131Q8NDD1 294 aaKnown RBP14.96□□□□□ -0.01
TCOF1-207ENST00000504761 ZNF560Q96MR9 790 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 POLIQ9UNA4 740 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 TTI1O43156 1089 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 USP2O75604 605 aaPredicted RBP14.96□□□□□ -0.01
TCOF1-207ENST00000504761 CPT1AP50416 773 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 SNRPFP62306 86 aaKnown RBP14.96□□□□□ -0.01
TCOF1-207ENST00000504761 SREBF2Q12772 1141 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 MTM1Q13496 603 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 TMED2Q15363 201 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 THEM5Q8N1Q8 247 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 REPS2Q8NFH8 660 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 SYN2Q92777 582 aaPredicted RBP14.96□□□□□ -0.01
TCOF1-207ENST00000504761 ACSF2Q96CM8 615 aaPredicted RBP14.96□□□□□ -0.01
TCOF1-207ENST00000504761 TRIM51Q9BSJ1 452 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 PLAAQ9Y263 795 aa14.96□□□□□ -0.01
TCOF1-207ENST00000504761 AHDC1Q5TGY3 1603 aaPredicted RBP14.96□□□□□ -0.01
TCOF1-207ENST00000504761 ATP8B1O43520 1251 aa14.96□□□□□ -0.02
TCOF1-207ENST00000504761 MOCS2O96007 188 aaPredicted RBP14.96□□□□□ -0.02
TCOF1-207ENST00000504761 ANXA13P27216 316 aa14.96□□□□□ -0.02
TCOF1-207ENST00000504761 ALDH3A1P30838 453 aa14.96□□□□□ -0.02
TCOF1-207ENST00000504761 DLG4P78352 724 aa14.96□□□□□ -0.02
TCOF1-207ENST00000504761 CCDC6Q16204 474 aa14.96□□□□□ -0.02
TCOF1-207ENST00000504761 PAN2Q504Q3 1202 aaKnown RBP14.96□□□□□ -0.02
TCOF1-207ENST00000504761 PODXLO00592 558 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms