RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 MCL1Q07820 350 aa27.72■■■□□ 2.03
PVT1-201ENST00000504719 UPP1Q16831 310 aa27.72■■■□□ 2.03
PVT1-201ENST00000504719 PRSS55Q6UWB4 352 aaPredicted RBP27.72■■■□□ 2.03
PVT1-201ENST00000504719 CD300LGQ6UXG3 332 aa27.72■■■□□ 2.03
PVT1-201ENST00000504719 PALB2Q86YC2 1186 aa27.72■■■□□ 2.03
PVT1-201ENST00000504719 CMASQ8NFW8 434 aaPredicted RBP27.72■■■□□ 2.03
PVT1-201ENST00000504719 HDAC7Q8WUI4 952 aa27.72■■■□□ 2.03
PVT1-201ENST00000504719 PIK3R5Q8WYR1 880 aa27.72■■■□□ 2.03
PVT1-201ENST00000504719 ZMAT2Q96NC0 199 aaKnown RBP27.72■■■□□ 2.03
PVT1-201ENST00000504719 GOLGA2P5Q9HBQ8 144 aa27.72■■■□□ 2.03
PVT1-201ENST00000504719 TSHZ2Q9NRE2 1034 aa27.72■■■□□ 2.03
PVT1-201ENST00000504719 CNTN3Q9P232 1028 aa27.72■■■□□ 2.03
PVT1-201ENST00000504719 DPP7Q9UHL4 492 aa27.72■■■□□ 2.03
PVT1-201ENST00000504719 C2CD4DB7Z1M9 353 aa27.71■■■□□ 2.03
PVT1-201ENST00000504719 MEFVO15553 781 aaPredicted RBP27.71■■■□□ 2.03
PVT1-201ENST00000504719 TRAK2O60296 914 aa27.71■■■□□ 2.03
PVT1-201ENST00000504719 RPL17P18621 184 aaKnown RBP27.71■■■□□ 2.03
PVT1-201ENST00000504719 SCP2P22307 547 aa27.71■■■□□ 2.03
PVT1-201ENST00000504719 IGFBP6P24592 240 aaPredicted RBP27.71■■■□□ 2.03
PVT1-201ENST00000504719 SOX4Q06945 474 aaPredicted RBP27.71■■■□□ 2.03
PVT1-201ENST00000504719 LILRA6Q6PI73 481 aa27.71■■■□□ 2.03
PVT1-201ENST00000504719 C15orf39Q6ZRI6 1047 aa27.71■■■□□ 2.03
PVT1-201ENST00000504719 CEP57Q86XR8 500 aa27.71■■■□□ 2.03
PVT1-201ENST00000504719 GLYCTKQ8IVS8 523 aa27.71■■■□□ 2.03
PVT1-201ENST00000504719 LNX1Q8TBB1 728 aaPredicted RBP27.71■■■□□ 2.03
PVT1-201ENST00000504719 KCNG4Q8TDN1 519 aa27.71■■■□□ 2.03
PVT1-201ENST00000504719 FIZ1Q96SL8 496 aa27.71■■■□□ 2.03
PVT1-201ENST00000504719 HAPLN2Q9GZV7 340 aa27.71■■■□□ 2.03
PVT1-201ENST00000504719 SLC38A7Q9NVC3 462 aa27.71■■■□□ 2.03
PVT1-201ENST00000504719 STK17AQ9UEE5 414 aa27.71■■■□□ 2.03
PVT1-201ENST00000504719 TBX20Q9UMR3 447 aa27.71■■■□□ 2.03
PVT1-201ENST00000504719 K7ENM7 598 aa27.7■■■□□ 2.02
PVT1-201ENST00000504719 CLDN3O15551 220 aa27.7■■■□□ 2.02
PVT1-201ENST00000504719 TGM5O43548 720 aa27.7■■■□□ 2.02
PVT1-201ENST00000504719 B3GAT3O94766 335 aa27.7■■■□□ 2.02
PVT1-201ENST00000504719 ZXDAP98168 799 aa27.7■■■□□ 2.02
PVT1-201ENST00000504719 ELMSAN1Q6PJG2 1045 aa27.7■■■□□ 2.02
PVT1-201ENST00000504719 BICD1Q96G01 975 aa27.7■■■□□ 2.02
PVT1-201ENST00000504719 TECTAO75443 2155 aa27.7■■■□□ 2.02
PVT1-201ENST00000504719 CUTAO60888 179 aa27.69■■■□□ 2.02
PVT1-201ENST00000504719 TBCAO75347 108 aaKnown RBP27.69■■■□□ 2.02
PVT1-201ENST00000504719 SPATA31D3P0C874 917 aa27.69■■■□□ 2.02
PVT1-201ENST00000504719 PSMD5Q16401 504 aa27.69■■■□□ 2.02
PVT1-201ENST00000504719 SLC10A6Q3KNW5 377 aa27.69■■■□□ 2.02
PVT1-201ENST00000504719 SEZ6Q53EL9 994 aa27.69■■■□□ 2.02
PVT1-201ENST00000504719 RRAGBQ5VZM2 374 aa27.69■■■□□ 2.02
PVT1-201ENST00000504719 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.69■■■□□ 2.02
PVT1-201ENST00000504719 SPATA31D4Q6ZUB0 917 aa27.69■■■□□ 2.02
PVT1-201ENST00000504719 DDX27Q96GQ7 796 aaKnown RBP27.69■■■□□ 2.02
PVT1-201ENST00000504719 CHAMP1Q96JM3 812 aa27.69■■■□□ 2.02
PVT1-201ENST00000504719 CLSTN3Q9BQT9 956 aa27.69■■■□□ 2.02
PVT1-201ENST00000504719 ZHX3Q9H4I2 956 aa27.69■■■□□ 2.02
PVT1-201ENST00000504719 PLEKHA4Q9H4M7 779 aa27.69■■■□□ 2.02
PVT1-201ENST00000504719 CCDC195A0A1B0GUA6 201 aa27.68■■■□□ 2.02
PVT1-201ENST00000504719 PAPLNO95428 1278 aa27.68■■■□□ 2.02
PVT1-201ENST00000504719 PIGRP01833 764 aa27.68■■■□□ 2.02
PVT1-201ENST00000504719 MYBP10242 640 aa27.68■■■□□ 2.02
PVT1-201ENST00000504719 FGFR3P22607 806 aa27.68■■■□□ 2.02
PVT1-201ENST00000504719 MATR3P43243 847 aaKnown RBP eCLIP27.68■■■□□ 2.024e-7■□□□□ 10.6
PVT1-201ENST00000504719 ME1P48163 572 aa27.68■■■□□ 2.02
PVT1-201ENST00000504719 PDXDC1Q6P996 788 aa27.68■■■□□ 2.02
PVT1-201ENST00000504719 C3orf58Q8NDZ4 430 aa27.68■■■□□ 2.02
PVT1-201ENST00000504719 RHOBTB2Q9BYZ6 727 aa27.68■■■□□ 2.02
PVT1-201ENST00000504719 PANK2Q9BZ23 570 aa27.68■■■□□ 2.02
PVT1-201ENST00000504719 USTQ9Y2C2 406 aa27.68■■■□□ 2.02
PVT1-201ENST00000504719 ATP6V1DQ9Y5K8 247 aa27.68■■■□□ 2.02
PVT1-201ENST00000504719 RFPL2O75678 378 aa27.67■■■□□ 2.02
PVT1-201ENST00000504719 NMT1P30419 496 aaKnown RBP27.67■■■□□ 2.02
PVT1-201ENST00000504719 LIG4P49917 911 aa27.67■■■□□ 2.02
PVT1-201ENST00000504719 GTF2BQ00403 316 aa27.67■■■□□ 2.02
PVT1-201ENST00000504719 PTPN21Q16825 1174 aa27.67■■■□□ 2.02
PVT1-201ENST00000504719 CYP26C1Q6V0L0 522 aa27.67■■■□□ 2.02
PVT1-201ENST00000504719 TDRD5Q8NAT2 981 aaKnown RBP27.67■■■□□ 2.02
PVT1-201ENST00000504719 RCOR1Q9UKL0 485 aa27.67■■■□□ 2.02
PVT1-201ENST00000504719 A0A087X0B3 334 aa27.66■■■□□ 2.02
PVT1-201ENST00000504719 PODXLO00592 558 aa27.66■■■□□ 2.02
PVT1-201ENST00000504719 ABCD1P33897 745 aa27.66■■■□□ 2.02
PVT1-201ENST00000504719 BRCC3P46736 316 aa27.66■■■□□ 2.02
PVT1-201ENST00000504719 KRT85P78386 507 aa27.66■■■□□ 2.02
PVT1-201ENST00000504719 AXDND1Q5T1B0 1012 aaPredicted RBP27.66■■■□□ 2.02
PVT1-201ENST00000504719 CCDC73Q6ZRK6 1079 aa27.66■■■□□ 2.02
PVT1-201ENST00000504719 ZDHHC14Q8IZN3 488 aa27.66■■■□□ 2.02
PVT1-201ENST00000504719 KREMEN2Q8NCW0 462 aa27.66■■■□□ 2.02
PVT1-201ENST00000504719 C18orf25Q96B23 403 aaPredicted RBP27.66■■■□□ 2.02
PVT1-201ENST00000504719 PCDHA7Q9UN72 937 aa27.66■■■□□ 2.02
PVT1-201ENST00000504719 HNRNPDLO14979 420 aaKnown RBP27.65■■■□□ 2.02
PVT1-201ENST00000504719 TRAPPC3O43617 180 aa27.65■■■□□ 2.02
PVT1-201ENST00000504719 CLTAP09496 248 aa27.65■■■□□ 2.02
PVT1-201ENST00000504719 SHC4Q6S5L8 630 aa27.65■■■□□ 2.02
PVT1-201ENST00000504719 TRIM67Q6ZTA4 783 aa27.65■■■□□ 2.02
PVT1-201ENST00000504719 CCDC149Q6ZUS6 474 aa27.65■■■□□ 2.02
PVT1-201ENST00000504719 SV2BQ7L1I2 683 aa27.65■■■□□ 2.02
PVT1-201ENST00000504719 DYMQ7RTS9 669 aa27.65■■■□□ 2.02
PVT1-201ENST00000504719 PLCD3Q8N3E9 789 aa27.65■■■□□ 2.02
PVT1-201ENST00000504719 PDILTQ8N807 584 aa27.65■■■□□ 2.02
PVT1-201ENST00000504719 DDX12PQ92771 950 aa27.65■■■□□ 2.02
PVT1-201ENST00000504719 ST6GALNAC4Q9H4F1 302 aa27.65■■■□□ 2.02
PVT1-201ENST00000504719 PLEKHA5Q9HAU0 1116 aa27.65■■■□□ 2.02
PVT1-201ENST00000504719 ZDHHC7Q9NXF8 308 aa27.65■■■□□ 2.02
PVT1-201ENST00000504719 TRIOO75962 3097 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms