RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 MYO1FO00160 1098 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 TAF2Q6P1X5 1199 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 LVRNQ6Q4G3 990 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 STAG2Q8N3U4 1231 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 MIGA1Q8NAN2 632 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 CDH19Q9H159 772 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 ISPDA4D126 451 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 IFNAR1P17181 557 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 MARCKSP29966 332 aaPredicted RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 CDK7P50613 346 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 KPNA1P52294 538 aaPredicted RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 FOSBP53539 338 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 KRT17Q04695 432 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 EXOC3L1Q86VI1 746 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 TSSK1BQ9BXA7 367 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 KCNF1Q9H3M0 494 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 SUCOQ9UBS9 1254 aaKnown RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 WARS2Q9UGM6 360 aaKnown RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 SMCO2A6NFE2 343 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 FGAP02671 866 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 METTL24Q5JXM2 366 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 KBTBD8Q8NFY9 601 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 TMCO6Q96DC7 493 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 DEPDC7Q96QD5 511 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 ING3Q9NXR8 418 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 VWA3AA6NCI4 1184 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 CAPN9O14815 690 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 SOX12O15370 315 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 DFNA5O60443 496 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 FOSP01100 380 aaPredicted RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 PORP16435 677 aaPredicted RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 HOXB8P17481 243 aaPredicted RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 PRDX6P30041 224 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 SLC18A3Q16572 532 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 ZC2HC1CQ53FD0 456 aaPredicted RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 SCUBE1Q8IWY4 988 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 DIS3L2Q8IYB7 885 aaKnown RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 COLGALT2Q8IYK4 626 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 DDX17Q92841 729 aaKnown RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 CDK19Q9BWU1 502 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 UBE2OQ9C0C9 1292 aaKnown RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 TAS2R1Q9NYW7 299 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 GTF3C4Q9UKN8 822 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 ASAP1Q9ULH1 1129 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 CHL1O00533 1208 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 COBLO75128 1261 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 HSPA4LO95757 839 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 ITGB3P05106 788 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 P4HBP07237 508 aaKnown RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 YAP1P46937 504 aaKnown RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 AP3S2P59780 193 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 GFPT1Q06210 699 aaPredicted RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 UBE3CQ15386 1083 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 ABCB5Q2M3G0 1257 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 EDRF1Q3B7T1 1238 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 TTC33Q6PID6 262 aaPredicted RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 BTBD10Q9BSF8 475 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 GNGT2O14610 69 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 NFE2L1Q14494 772 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 MZT2BQ6NZ67 158 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 ZNF804AQ7Z570 1209 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 FAM178BQ8IXR5 827 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 CEP170P1Q96L14 293 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 TMEM168Q9H0V1 697 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 ASCC2Q9H1I8 757 aaPredicted RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 BOLA2Q9H3K6 86 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 RRN3Q9NYV6 651 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 DNM3Q9UQ16 869 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 TGM6O95932 706 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 MAPK6Q16659 721 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 TTC30AQ86WT1 665 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 PACRGLQ8N7B6 248 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 HM13Q8TCT9 377 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 OSCP1Q8WVF1 389 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 NDNQ99608 321 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 CINPQ9BW66 212 aaPredicted RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 DDX20Q9UHI6 824 aaKnown RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 ING4Q9UNL4 249 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 L3MBTL1Q9Y468 752 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 BRAFP15056 766 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 FLT3P36888 993 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 MTFR1Q15390 333 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 DPCR1Q3MIW9 517 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 C11orf63Q6NUN7 778 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 GUF1Q8N442 669 aaKnown RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 TMEM109Q9BVC6 243 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 RTFDC1Q9BY42 306 aaPredicted RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 C1orf112Q9NSG2 853 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 CD3EAPO15446 510 aaKnown RBP6.39□□□□□ -1.39
LINC02397-201ENST00000504409 CCNE2O96020 404 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 MMP1P03956 469 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 THRAP10827 490 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 ZNF568Q3ZCX4 644 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 ATP13A5Q4VNC0 1218 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 NIPAL1Q6NVV3 410 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 FRMD5Q7Z6J6 570 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 NUP93Q8N1F7 819 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 USP38Q8NB14 1042 aa6.39□□□□□ -1.39
LINC02397-201ENST00000504409 C15orf40Q8WUR7 153 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms