RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 CEP104O60308 925 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 B4GALT4O60513 344 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 ASS1P00966 412 aaKnown RBP10.51□□□□□ -0.73
COL1A1-210ENST00000504289 CYP1A1P04798 512 aaPredicted RBP10.51□□□□□ -0.73
COL1A1-210ENST00000504289 CLTAP09496 248 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 CTNNA2P26232 953 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 ADORA2AP29274 412 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 GBP1P32455 592 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 SLC1A1P43005 524 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 MATR3P43243 847 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL1A1-210ENST00000504289 ACOT2P49753 483 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 MKRN4PQ13434 485 aaPredicted RBP10.51□□□□□ -0.73
COL1A1-210ENST00000504289 BIRC3Q13489 604 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 NCOA4Q13772 614 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 GRB14Q14449 540 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 PCBP1Q15365 356 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL1A1-210ENST00000504289 CCL15Q16663 113 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 SGSM1Q2NKQ1 1148 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 ALS2CLQ60I27 953 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 IQSEC1Q6DN90 963 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 TAPT1Q6NXT6 567 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 SLC47A2Q86VL8 602 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 FBXO16Q8IX29 292 aaPredicted RBP10.51□□□□□ -0.73
COL1A1-210ENST00000504289 MREGQ8N565 214 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 TTC39CQ8N584 583 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 LINC01465Q8N7H1 131 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 GOLGA6L1Q8N7Z2 621 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 RNF149Q8NC42 400 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 FAM71BQ8TC56 605 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 KAT5Q92993 513 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 TATDN2Q93075 761 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 PCDHB18PQ96TA0 734 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 HAPLN2Q9GZV7 340 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 ABHD16BQ9H3Z7 469 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 GBA2Q9HCG7 927 aaPredicted RBP10.51□□□□□ -0.73
COL1A1-210ENST00000504289 TOPORSQ9NS56 1045 aaPredicted RBP10.51□□□□□ -0.73
COL1A1-210ENST00000504289 CPSF3Q9UKF6 684 aaKnown RBP10.51□□□□□ -0.73
COL1A1-210ENST00000504289 TRPC6Q9Y210 931 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 ALG6Q9Y672 507 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 ZNF236Q9UL36 1845 aa10.51□□□□□ -0.73
COL1A1-210ENST00000504289 RRN3P2A6NIE6 340 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 KRIT1O00522 736 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 SORBS3O60504 671 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 PEX10O60683 326 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 PHACTR2O75167 634 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 VNN1O95497 513 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 C22orf31O95567 290 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 LSM8O95777 96 aaKnown RBP10.5□□□□□ -0.73
COL1A1-210ENST00000504289 MCF2P10911 925 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 UNGP13051 313 aaPredicted RBP10.5□□□□□ -0.73
COL1A1-210ENST00000504289 KRT5P13647 590 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 ACO1P21399 889 aaKnown RBP10.5□□□□□ -0.73
COL1A1-210ENST00000504289 ABCB4P21439 1286 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 CENPCQ03188 943 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 LIN9Q5TKA1 542 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 WDR78Q5VTH9 848 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 SPRYD7Q5W111 196 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 EFCAB12Q6NXP0 572 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 EEPD1Q7L9B9 569 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 APBB1IPQ7Z5R6 666 aaPredicted RBP10.5□□□□□ -0.73
COL1A1-210ENST00000504289 PALB2Q86YC2 1186 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 NT5DC4Q86YG4 428 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 MAIP1Q8WWC4 291 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 BRI3BPQ8WY22 251 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 SEC14L1Q92503 715 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 ARHGEF26Q96DR7 871 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 MS4A14Q96JA4 679 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 PSMB7Q99436 277 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 ZSWIM1Q9BR11 485 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 TCHPQ9BT92 498 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 FAM129AQ9BZQ8 928 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 ZNF518BQ9C0D4 1074 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 KATNBL1Q9H079 304 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 ASB7Q9H672 318 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 EFCC1Q9HA90 598 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 SUGCTQ9HAC7 445 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 MRPL47Q9HD33 250 aaKnown RBP10.5□□□□□ -0.73
COL1A1-210ENST00000504289 OSGEPQ9NPF4 335 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.5□□□□□ -0.73
COL1A1-210ENST00000504289 TAS2R14Q9NYV8 317 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 ANKFY1Q9P2R3 1169 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 DMGDHQ9UI17 866 aaKnown RBP10.5□□□□□ -0.73
COL1A1-210ENST00000504289 CLEC11AQ9Y240 323 aa10.5□□□□□ -0.73
COL1A1-210ENST00000504289 NOC2LQ9Y3T9 749 aaKnown RBP10.5□□□□□ -0.73
COL1A1-210ENST00000504289 PLXNA1Q9UIW2 1896 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 FAM187AA6NFU0 413 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 ZEB2O60315 1214 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 HEXIM1O94992 359 aaKnown RBP10.49□□□□□ -0.73
COL1A1-210ENST00000504289 TNNC2P02585 160 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 LGALS2P05162 132 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 MMEP08473 750 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 CYP2C8P10632 490 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 CTNNA1P35221 906 aaKnown RBP10.49□□□□□ -0.73
COL1A1-210ENST00000504289 ZNF132P52740 706 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 DRG2P55039 364 aaKnown RBP10.49□□□□□ -0.73
COL1A1-210ENST00000504289 NOP14P78316 857 aaKnown RBP10.49□□□□□ -0.73
COL1A1-210ENST00000504289 C1QBPQ07021 282 aaKnown RBP10.49□□□□□ -0.73
COL1A1-210ENST00000504289 PTP4A2Q12974 167 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 DHX34Q14147 1143 aaKnown RBP10.49□□□□□ -0.73
COL1A1-210ENST00000504289 TERF2Q15554 542 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms