RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 MSRAQ9UJ68 235 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 KCNE5Q9UJ90 142 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 USP18Q9UMW8 372 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 BTBD3Q9Y2F9 522 aa3.01□□□□□ -1.93
HMGB3P17-201ENST00000504195 ZMYM3Q14202 1370 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 A0A1B0GTW7 788 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 PPP1R12AO14974 1030 aaPredicted RBP3□□□□□ -1.93
HMGB3P17-201ENST00000504195 EIF5BO60841 1220 aaKnown RBP3□□□□□ -1.93
HMGB3P17-201ENST00000504195 ERN1O75460 977 aaKnown RBP3□□□□□ -1.93
HMGB3P17-201ENST00000504195 RFPL3O75679 317 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 SNRPA1P09661 255 aaKnown RBP3□□□□□ -1.93
HMGB3P17-201ENST00000504195 LTA4HP09960 611 aaKnown RBP3□□□□□ -1.93
HMGB3P17-201ENST00000504195 CKBP12277 381 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 ATP2A2P16615 1042 aaKnown RBP3□□□□□ -1.93
HMGB3P17-201ENST00000504195 SDSP20132 328 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 MT3P25713 68 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 FLT3LGP49771 235 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 CLRN1P58418 232 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 KIAA0895LQ68EN5 471 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 FOXR2Q6PJQ5 311 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 Q6ZTC4 211 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 GLB1L2Q8IW92 636 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 GAB3Q8WWW8 586 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 MRFAP1L1Q96HT8 127 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 FUBP3Q96I24 572 aaKnown RBP eCLIP3□□□□□ -1.93
HMGB3P17-201ENST00000504195 PAWRQ96IZ0 340 aaKnown RBP3□□□□□ -1.93
HMGB3P17-201ENST00000504195 ORAI3Q9BRQ5 295 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 EBF3Q9H4W6 596 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3□□□□□ -1.93
HMGB3P17-201ENST00000504195 H2AFY2Q9P0M6 372 aaPredicted RBP3□□□□□ -1.93
HMGB3P17-201ENST00000504195 CDK11AQ9UQ88 783 aaPredicted RBP3□□□□□ -1.93
HMGB3P17-201ENST00000504195 CACNA1IQ9P0X4 2223 aa3□□□□□ -1.93
HMGB3P17-201ENST00000504195 AOX1Q06278 1338 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 KAT6AQ92794 2004 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 LINC01548A6NM66 108 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 ELL2O00472 640 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 MPPED1O15442 326 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 KPNA6O60684 536 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 F2P00734 622 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 PFKMP08237 780 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 PLCD1P51178 756 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 NEK4P51957 841 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 KPNA1P52294 538 aaPredicted RBP2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 OCRLQ01968 901 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 PABPC4Q13310 644 aaKnown RBP eCLIP2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 SQSTM1Q13501 440 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 BMS1Q14692 1282 aaKnown RBP2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 UBE3CQ15386 1083 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 FAM47AQ5JRC9 791 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 GPR158Q5T848 1215 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 SYNPOQ8N3V7 929 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 SH3TC2Q8TF17 1288 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 RSAD2Q8WXG1 361 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 TXLNGQ9NUQ3 528 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 MDFICQ9P1T7 246 aa2.99□□□□□ -1.93
HMGB3P17-201ENST00000504195 ITGA10O75578 1167 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 ASMTLO95671 621 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 GPANK1O95872 356 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 CERS1P27544 350 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 LSP1P33241 339 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 CRHR1P34998 444 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 GRIA3P42263 894 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 MCAMP43121 646 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 VAV2P52735 878 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 DSG1Q02413 1049 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 PPARAQ07869 468 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 MGAT5Q09328 741 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 SART3Q15020 963 aaKnown RBP2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 CYP2A13Q16696 494 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 ZNF628Q5EBL2 1059 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 ZBTB41Q5SVQ8 909 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 KAZNQ674X7 775 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 SUMO4Q6EEV6 95 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 CHTF18Q8WVB6 975 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 HMCESQ96FZ2 354 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 ZNF496Q96IT1 587 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 PHACTR3Q96KR7 559 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 FDXACB1Q9BRP7 624 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 WNT8AQ9H1J5 351 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 THG1LQ9NWX6 298 aaKnown RBP2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 KCNG1Q9UIX4 513 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 NUMBLQ9Y6R0 609 aa2.98□□□□□ -1.93
HMGB3P17-201ENST00000504195 PRSS38A1L453 326 aa2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 GCOM1H8Y6P7 765 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 PPEF2O14830 753 aa2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 PRAMEF4O60810 478 aa2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 CD1AP06126 327 aa2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 TCEA2Q15560 299 aa2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 MED25Q71SY5 747 aa2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 NEK8Q86SG6 692 aa2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 C11orf74Q86VG3 221 aa2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 DRC7Q8IY82 874 aa2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 NXPE1Q8N323 547 aa2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 ZNF610Q8N9Z0 462 aa2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 SNX33Q8WV41 574 aa2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 DNAJC2Q99543 621 aaKnown RBP2.97□□□□□ -1.93
HMGB3P17-201ENST00000504195 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms