RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 PCDHA4Q9UN74 947 aa17.53■□□□□ 0.4
PDLIM7-210ENST00000503827 NID2Q14112 1375 aa17.53■□□□□ 0.4
PDLIM7-210ENST00000503827 AXIN1O15169 862 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 MICAL2O94851 1124 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 PAPSS2O95340 614 aaPredicted RBP17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 FGFR3P22607 806 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 ELF1P32519 619 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 PTGDRQ13258 359 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 EPHA7Q15375 998 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 SF3A2Q15428 464 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 PRSS36Q5K4E3 855 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 C1orf228Q6PIY5 440 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 VITQ6UXI7 678 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 DEPDC1BQ8WUY9 529 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 ASB16Q96NS5 453 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 CORO1BQ9BR76 489 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 NFKBIZQ9BYH8 718 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 ARRDC1-AS1Q9H2J1 176 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 ZSWIM4Q9H7M6 989 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 XPNPEP1Q9NQW7 623 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 BACE2Q9Y5Z0 518 aa17.52■□□□□ 0.4
PDLIM7-210ENST00000503827 ARHGEF37A1IGU5 675 aa17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 K7ESF4 209 aa17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 PTGESO14684 152 aa17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 ZNF263O14978 683 aa17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 SLC37A4O43826 429 aa17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 ZNF806P0C7X5 589 aa17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 MLLT6P55198 1093 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 NTRK3Q16288 839 aa17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 STPG1Q5TH74 334 aa17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 UNQ6494/PRO21346Q6UXR6 183 aa17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 Q6ZUG5 572 aa17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 ANKS3Q6ZW76 656 aa17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 PDZD4Q76G19 769 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 RASEFQ8IZ41 740 aa17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 BLIDQ8IZY5 108 aa17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 ASAP3Q8TDY4 903 aa17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 BRF1Q92994 677 aa17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 MSANTD3Q96H12 275 aa17.51■□□□□ 0.39
PDLIM7-210ENST00000503827 C1QTNF9BB2RNN3 333 aa17.5■□□□□ 0.39
PDLIM7-210ENST00000503827 PRRG1O14668 218 aa17.5■□□□□ 0.39
PDLIM7-210ENST00000503827 KCNK5O95279 499 aa17.5■□□□□ 0.39
PDLIM7-210ENST00000503827 C1QTNF9P0C862 333 aa17.5■□□□□ 0.39
PDLIM7-210ENST00000503827 IFNAR1P17181 557 aa17.5■□□□□ 0.39
PDLIM7-210ENST00000503827 ZNF461Q8TAF7 563 aa17.5■□□□□ 0.39
PDLIM7-210ENST00000503827 CSGALNACT1Q8TDX6 532 aa17.5■□□□□ 0.39
PDLIM7-210ENST00000503827 SMARCD2Q92925 531 aa17.5■□□□□ 0.39
PDLIM7-210ENST00000503827 TCEAL4Q96EI5 215 aa17.5■□□□□ 0.39
PDLIM7-210ENST00000503827 DYDC2Q96IM9 177 aa17.5■□□□□ 0.39
PDLIM7-210ENST00000503827 LOXL4Q96JB6 756 aa17.5■□□□□ 0.39
PDLIM7-210ENST00000503827 RGL1Q9NZL6 768 aa17.5■□□□□ 0.39
PDLIM7-210ENST00000503827 TRIP11Q15643 1979 aa17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 WDR27A2RRH5 827 aa17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 TMEM189-UBE2V1I3L0A0 370 aa17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 ZBTB39O15060 712 aa17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 TRAPPC3O43617 180 aa17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 MARCH6O60337 910 aa17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 B3GAT3O94766 335 aa17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 ARL2P36404 184 aa17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 CTTNQ14247 550 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 NAB2Q15742 525 aa17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 CCDC6Q16204 474 aa17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 CYP4A22Q5TCH4 519 aa17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 NCAPH2Q6IBW4 605 aa17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 WDR5BQ86VZ2 330 aa17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 LSM14BQ9BX40 385 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 KCNMB3Q9NPA1 279 aa17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 RXFP3Q9NSD7 469 aa17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 RBM12Q9NTZ6 932 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 SNTG2Q9NY99 539 aa17.49■□□□□ 0.39
PDLIM7-210ENST00000503827 M0R2N6 131 aa17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 NRG2O14511 850 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 DGAT1O75907 488 aa17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 GLRA2P23416 452 aa17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 HOXA6P31267 233 aa17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 CYP4A11Q02928 519 aa17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 INF2Q27J81 1249 aa17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 DGKKQ5KSL6 1271 aa17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 MFSD6LQ8IWD5 586 aa17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 TPH2Q8IWU9 490 aa17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 TRIM22Q8IYM9 498 aa17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 KDF1Q8NAX2 398 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 DDX27Q96GQ7 796 aaKnown RBP17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 PRIMPOLQ96LW4 560 aa17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 C8orf33Q9H7E9 229 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 PRMT7Q9NVM4 692 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 SDK1Q7Z5N4 2213 aa17.48■□□□□ 0.39
PDLIM7-210ENST00000503827 FRYQ5TBA9 3013 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 N4BP3O15049 544 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 RECQL4O94761 1208 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 EPN2O95208 641 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 CPA1P15085 419 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 TKTP29401 623 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 VIPR2P41587 438 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 RBM25P49756 843 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 KPNA1P52294 538 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 ROR1Q01973 937 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 TMEM132AQ24JP5 1023 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 IQCEQ6IPM2 695 aa17.47■□□□□ 0.39
PDLIM7-210ENST00000503827 PSAPL1Q6NUJ1 521 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms