RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 RAB23Q9ULC3 237 aa17.46■□□□□ 0.39
DDR1-250ENST00000503628 MRPS23Q9Y3D9 190 aaKnown RBP17.46■□□□□ 0.39
DDR1-250ENST00000503628 CACNA1GO43497 2377 aa17.46■□□□□ 0.39
DDR1-250ENST00000503628 USP24Q9UPU5 2620 aa17.46■□□□□ 0.39
DDR1-250ENST00000503628 RALGAPA1Q6GYQ0 2036 aa17.45■□□□□ 0.38
DDR1-250ENST00000503628 ZMYM2Q9UBW7 1377 aa17.45■□□□□ 0.38
DDR1-250ENST00000503628 POU2F2P09086 479 aa17.45■□□□□ 0.38
DDR1-250ENST00000503628 TDGF1P13385 188 aa17.45■□□□□ 0.38
DDR1-250ENST00000503628 ARL2P36404 184 aa17.45■□□□□ 0.38
DDR1-250ENST00000503628 FOSBP53539 338 aa17.45■□□□□ 0.38
DDR1-250ENST00000503628 TRIM29Q14134 588 aa17.45■□□□□ 0.38
DDR1-250ENST00000503628 PPM1JQ5JR12 505 aa17.45■□□□□ 0.38
DDR1-250ENST00000503628 TANGO2Q6ICL3 276 aa17.45■□□□□ 0.38
DDR1-250ENST00000503628 PPP4R3AQ6IN85 833 aa17.45■□□□□ 0.38
DDR1-250ENST00000503628 FAM184AQ8NB25 1140 aa17.45■□□□□ 0.38
DDR1-250ENST00000503628 CXCL16Q9H2A7 254 aa17.45■□□□□ 0.38
DDR1-250ENST00000503628 NDRG2Q9UN36 371 aaKnown RBP17.45■□□□□ 0.38
DDR1-250ENST00000503628 F5P12259 2224 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 PTGESO14684 152 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 SLC30A4O14863 429 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 MARCH6O60337 910 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 SLITRK3O94933 977 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 GLRA2P23416 452 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 NRLP54845 237 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 CUL4AQ13619 759 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 SLC5A9Q2M3M2 681 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 LAIR1Q6GTX8 287 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 PDXDC1Q6P996 788 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 NEK8Q86SG6 692 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 ZNF687Q8N1G0 1237 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 CELF5Q8N6W0 485 aaKnown RBP17.44■□□□□ 0.38
DDR1-250ENST00000503628 SNX21Q969T3 373 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 NFKBIZQ9BYH8 718 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 BRMS1Q9HCU9 246 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 GDE1Q9NZC3 331 aa17.44■□□□□ 0.38
DDR1-250ENST00000503628 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.44■□□□□ 0.38
DDR1-250ENST00000503628 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.43■□□□□ 0.38
DDR1-250ENST00000503628 K7ELQ4 463 aaPredicted RBP17.43■□□□□ 0.38
DDR1-250ENST00000503628 TBX3O15119 743 aa17.43■□□□□ 0.38
DDR1-250ENST00000503628 CCNT1O60563 726 aaKnown RBP17.43■□□□□ 0.38
DDR1-250ENST00000503628 THP07101 528 aa17.43■□□□□ 0.38
DDR1-250ENST00000503628 RHOP08100 348 aa17.43■□□□□ 0.38
DDR1-250ENST00000503628 GCFC2P16383 781 aaKnown RBP17.43■□□□□ 0.38
DDR1-250ENST00000503628 IGFBP6P24592 240 aaPredicted RBP17.43■□□□□ 0.38
DDR1-250ENST00000503628 KRT2P35908 639 aa17.43■□□□□ 0.38
DDR1-250ENST00000503628 SPIRE1Q08AE8 756 aa17.43■□□□□ 0.38
DDR1-250ENST00000503628 ELAVL2Q12926 359 aaKnown RBP17.43■□□□□ 0.38
DDR1-250ENST00000503628 NETO1Q8TDF5 533 aa17.43■□□□□ 0.38
DDR1-250ENST00000503628 ELSPBP1Q96BH3 223 aa17.43■□□□□ 0.38
DDR1-250ENST00000503628 C8orf76Q96K31 380 aa17.43■□□□□ 0.38
DDR1-250ENST00000503628 CHRDQ9H2X0 955 aa17.43■□□□□ 0.38
DDR1-250ENST00000503628 KIF3AQ9Y496 699 aa17.43■□□□□ 0.38
DDR1-250ENST00000503628 CCDC194A0A1B0GVG4 234 aa17.42■□□□□ 0.38
DDR1-250ENST00000503628 DGAT1O75907 488 aa17.42■□□□□ 0.38
DDR1-250ENST00000503628 RETP07949 1114 aa17.42■□□□□ 0.38
DDR1-250ENST00000503628 CEBPBP17676 345 aa17.42■□□□□ 0.38
DDR1-250ENST00000503628 GRM2Q14416 872 aa17.42■□□□□ 0.38
DDR1-250ENST00000503628 NAB2Q15742 525 aa17.42■□□□□ 0.38
DDR1-250ENST00000503628 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.42■□□□□ 0.38
DDR1-250ENST00000503628 MAMSTRQ6ZN01 415 aa17.42■□□□□ 0.38
DDR1-250ENST00000503628 PRR23BQ6ZRT6 265 aa17.42■□□□□ 0.38
DDR1-250ENST00000503628 RTL10Q7L3V2 364 aa17.42■□□□□ 0.38
DDR1-250ENST00000503628 POTEDQ86YR6 584 aa17.42■□□□□ 0.38
DDR1-250ENST00000503628 OXER1Q8TDS5 423 aa17.42■□□□□ 0.38
DDR1-250ENST00000503628 DNASE1L2Q92874 299 aa17.42■□□□□ 0.38
DDR1-250ENST00000503628 SNTG2Q9NY99 539 aa17.42■□□□□ 0.38
DDR1-250ENST00000503628 MTRRQ9UBK8 725 aa17.42■□□□□ 0.38
DDR1-250ENST00000503628 SMC3Q9UQE7 1217 aa17.42■□□□□ 0.38
DDR1-250ENST00000503628 CDY1Q9Y6F8 540 aa17.42■□□□□ 0.38
DDR1-250ENST00000503628 TTLL13PA6NNM8 815 aa17.41■□□□□ 0.38
DDR1-250ENST00000503628 MAN2B1O00754 1011 aa17.41■□□□□ 0.38
DDR1-250ENST00000503628 FGFR3P22607 806 aa17.41■□□□□ 0.38
DDR1-250ENST00000503628 GJB2P29033 226 aa17.41■□□□□ 0.38
DDR1-250ENST00000503628 GUCY1B3Q02153 619 aa17.41■□□□□ 0.38
DDR1-250ENST00000503628 PPP2R5DQ14738 602 aa17.41■□□□□ 0.38
DDR1-250ENST00000503628 FBXO18Q8NFZ0 1043 aa17.41■□□□□ 0.38
DDR1-250ENST00000503628 EIF2AK1Q9BQI3 630 aaKnown RBP17.41■□□□□ 0.38
DDR1-250ENST00000503628 POLR3FQ9H1D9 316 aaPredicted RBP17.41■□□□□ 0.38
DDR1-250ENST00000503628 BRD9Q9H8M2 597 aa17.41■□□□□ 0.38
DDR1-250ENST00000503628 LMAN1LQ9HAT1 526 aa17.41■□□□□ 0.38
DDR1-250ENST00000503628 SEMA4GQ9NTN9 838 aa17.41■□□□□ 0.38
DDR1-250ENST00000503628 ANKEF1Q9NU02 776 aa17.41■□□□□ 0.38
DDR1-250ENST00000503628 A0A087WWV3 80 aa17.4■□□□□ 0.38
DDR1-250ENST00000503628 LRRIQ4A6NIV6 560 aa17.4■□□□□ 0.38
DDR1-250ENST00000503628 NRG2O14511 850 aaPredicted RBP17.4■□□□□ 0.38
DDR1-250ENST00000503628 LRP3O75074 770 aa17.4■□□□□ 0.38
DDR1-250ENST00000503628 RECQL4O94761 1208 aa17.4■□□□□ 0.38
DDR1-250ENST00000503628 PTPN2P17706 415 aa17.4■□□□□ 0.38
DDR1-250ENST00000503628 FCARP24071 287 aa17.4■□□□□ 0.38
DDR1-250ENST00000503628 NR5A1Q13285 461 aa17.4■□□□□ 0.38
DDR1-250ENST00000503628 SAFBQ15424 915 aaKnown RBP eCLIP17.4■□□□□ 0.38
DDR1-250ENST00000503628 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
DDR1-250ENST00000503628 HSCBQ8IWL3 235 aa17.4■□□□□ 0.38
DDR1-250ENST00000503628 DIS3L2Q8IYB7 885 aaKnown RBP17.4■□□□□ 0.38
DDR1-250ENST00000503628 TNFRSF25Q93038 417 aa17.4■□□□□ 0.38
DDR1-250ENST00000503628 HSD17B14Q9BPX1 270 aa17.4■□□□□ 0.38
DDR1-250ENST00000503628 AVENQ9NQS1 362 aaPredicted RBP17.4■□□□□ 0.38
DDR1-250ENST00000503628 PRMT7Q9NVM4 692 aaPredicted RBP17.4■□□□□ 0.38
DDR1-250ENST00000503628 TRIP11Q15643 1979 aa17.4■□□□□ 0.38
DDR1-250ENST00000503628 TICRRQ7Z2Z1 1910 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms