RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 REEP2Q9BRK0 252 aa6.15□□□□□ -1.42
PTPN20-212ENST00000502254 FUCA2Q9BTY2 467 aa6.15□□□□□ -1.42
PTPN20-212ENST00000502254 LRRC3Q9BY71 257 aa6.15□□□□□ -1.42
PTPN20-212ENST00000502254 SOX17Q9H6I2 414 aaPredicted RBP6.15□□□□□ -1.42
PTPN20-212ENST00000502254 SPC25Q9HBM1 224 aa6.15□□□□□ -1.42
PTPN20-212ENST00000502254 SLC39A2Q9NP94 309 aa6.15□□□□□ -1.42
PTPN20-212ENST00000502254 XPNPEP3Q9NQH7 507 aa6.15□□□□□ -1.42
PTPN20-212ENST00000502254 CYP26B1Q9NR63 512 aa6.15□□□□□ -1.42
PTPN20-212ENST00000502254 MAPK8IP1Q9UQF2 711 aa6.15□□□□□ -1.42
PTPN20-212ENST00000502254 GDAQ9Y2T3 454 aa6.15□□□□□ -1.42
PTPN20-212ENST00000502254 EMSYQ7Z589 1322 aa6.15□□□□□ -1.43
PTPN20-212ENST00000502254 ZSWIM8A7E2V4 1837 aa6.15□□□□□ -1.43
PTPN20-212ENST00000502254 ZNF236Q9UL36 1845 aa6.15□□□□□ -1.43
PTPN20-212ENST00000502254 THSD7BQ9C0I4 1608 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 FAM221AA4D161 298 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 MYADML2A6NDP7 307 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 SOX1O00570 391 aaPredicted RBP6.14□□□□□ -1.43
PTPN20-212ENST00000502254 TERTO14746 1132 aaKnown RBP6.14□□□□□ -1.43
PTPN20-212ENST00000502254 ZEB2O60315 1214 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 HBP1O60381 514 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 RGS9O75916 674 aaPredicted RBP6.14□□□□□ -1.43
PTPN20-212ENST00000502254 RHOBTB3O94955 611 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 HSPA1AP0DMV8 641 aaKnown RBP6.14□□□□□ -1.43
PTPN20-212ENST00000502254 HSPA1BP0DMV9 641 aaKnown RBP6.14□□□□□ -1.43
PTPN20-212ENST00000502254 HSPA8P11142 646 aaKnown RBP6.14□□□□□ -1.43
PTPN20-212ENST00000502254 GAP43P17677 238 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 EPHA1P21709 976 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 GUCY2CP25092 1073 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 ARNTP27540 789 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 ZNF165P49910 485 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 LBX1P52954 281 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 SOX10P56693 466 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 STX17P56962 302 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 ZNF252P-AS1Q0IIN9 211 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 KCNB1Q14721 858 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 LRRC41Q15345 812 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 FSCN1Q16658 493 aaKnown RBP6.14□□□□□ -1.43
PTPN20-212ENST00000502254 FAM26FQ5R3K3 315 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 ZNF658Q5TYW1 1059 aaPredicted RBP6.14□□□□□ -1.43
PTPN20-212ENST00000502254 CNNM4Q6P4Q7 775 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 C1orf229Q6ZS94 237 aaPredicted RBP6.14□□□□□ -1.43
PTPN20-212ENST00000502254 SFR1Q86XK3 245 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 AOPEPQ8N6M6 819 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 TRIML1Q8N9V2 468 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 MLKLQ8NB16 471 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 GOLM1Q8NBJ4 401 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 SPATA20Q8TB22 786 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 STK35Q8TDR2 534 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 ATP8B4Q8TF62 1192 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 TRAPPC12Q8WVT3 735 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 ACDQ96AP0 544 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 C16orf70Q9BSU1 422 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 LACRTQ9GZZ8 138 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 NAT10Q9H0A0 1025 aaKnown RBP6.14□□□□□ -1.43
PTPN20-212ENST00000502254 RNPEPQ9H4A4 650 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 ATP6V0A4Q9HBG4 840 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 CBX8Q9HC52 389 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 GPRC5CQ9NQ84 441 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 CACNA2D2Q9NY47 1150 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 ERAP1Q9NZ08 941 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 ZNF215Q9UL58 517 aaPredicted RBP6.14□□□□□ -1.43
PTPN20-212ENST00000502254 PTPN22Q9Y2R2 807 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 Q9Y3F1 56 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 COL4A3BPQ9Y5P4 624 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 SYNRGQ9UMZ2 1314 aa6.14□□□□□ -1.43
PTPN20-212ENST00000502254 LRRC37A2A6NM11 1700 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 CCDC169A6NNP5 214 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 BECN2A8MW95 431 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 H3BRJ5 948 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 GCNT3O95395 438 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 INSRRP14616 1297 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 NMT1P30419 496 aaKnown RBP6.13□□□□□ -1.43
PTPN20-212ENST00000502254 GTF2F1P35269 517 aaKnown RBP eCLIP6.13□□□□□ -1.43
PTPN20-212ENST00000502254 PRCPP42785 496 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 CTCFP49711 727 aaPredicted RBP6.13□□□□□ -1.43
PTPN20-212ENST00000502254 SLC26A2P50443 739 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 GJA9P57773 515 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 STK4Q13043 487 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 PPFIA1Q13136 1202 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 MAPK7Q13164 816 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 STIM1Q13586 685 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 IKBKEQ14164 716 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 EMC2Q15006 297 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 LRRC14Q15048 493 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 TARBP2Q15633 366 aaKnown RBP6.13□□□□□ -1.43
PTPN20-212ENST00000502254 KCNA10Q16322 511 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 KIAA0753Q2KHM9 967 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 SLC9C1Q4G0N8 1177 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 ZNF484Q5JVG2 852 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 ODR4Q5SWX8 454 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 MAP3K21Q5TCX8 1036 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 PDZD3Q86UT5 571 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 LUZP1Q86V48 1076 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 SULF2Q8IWU5 870 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 NELFCDQ8IXH7 590 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 DAW1Q8N136 415 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 LRRC71Q8N4P6 559 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 METTL13Q8N6R0 699 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 NELFBQ8WX92 580 aa6.13□□□□□ -1.43
PTPN20-212ENST00000502254 SLC7A3Q8WY07 619 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms