RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 FAM3CQ92520 227 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 TCEAL4Q96EI5 215 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 FAM20AQ96MK3 541 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 FAM126AQ9BYI3 521 aaPredicted RBP10.1□□□□□ -0.79
CCDC171-209ENST00000498725 ZSWIM4Q9H7M6 989 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 KCNMB3Q9NPA1 279 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 GDAQ9Y2T3 454 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 PPME1Q9Y570 386 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 SNX14Q9Y5W7 946 aa10.1□□□□□ -0.79
CCDC171-209ENST00000498725 GREB1Q4ZG55 1949 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 ACACBO00763 2458 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 M0R2N6 131 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 PRRG1O14668 218 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 CPLX1O14810 134 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 TBX3O15119 743 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 USO1O60763 962 aaKnown RBP10.09□□□□□ -0.79
CCDC171-209ENST00000498725 RECQL4O94761 1208 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 LRG1P02750 347 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 RETP07949 1114 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 TDGF1P13385 188 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 PTPN2P17706 415 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 TKTP29401 623 aaKnown RBP10.09□□□□□ -0.79
CCDC171-209ENST00000498725 HOXC13P31276 330 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 BRCC3P46736 316 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 RAB33AQ14088 237 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 PCBP1Q15365 356 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCDC171-209ENST00000498725 NPY5RQ15761 445 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 UVSSAQ2YD98 709 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 FAM78AQ5JUQ0 283 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 GLRA4Q5JXX5 417 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 IL31Q6EBC2 164 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 MOXD1Q6UVY6 613 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 CEP68Q76N32 757 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 NEK8Q86SG6 692 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 GPIHBP1Q8IV16 184 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 CELF5Q8N6W0 485 aaKnown RBP10.09□□□□□ -0.79
CCDC171-209ENST00000498725 PIGOQ8TEQ8 1089 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 HAS1Q92839 578 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 ELSPBP1Q96BH3 223 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 EIF2AK1Q9BQI3 630 aaKnown RBP10.09□□□□□ -0.79
CCDC171-209ENST00000498725 TRMT61BQ9BVS5 477 aaKnown RBP10.09□□□□□ -0.79
CCDC171-209ENST00000498725 CHRDQ9H2X0 955 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 GOLGA2P5Q9HBQ8 144 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 ZFP14Q9HCL3 533 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 GPRC5CQ9NQ84 441 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 RBM12Q9NTZ6 932 aaKnown RBP10.09□□□□□ -0.79
CCDC171-209ENST00000498725 KCNH3Q9ULD8 1083 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 PIAS3Q9Y6X2 628 aa10.09□□□□□ -0.79
CCDC171-209ENST00000498725 TPRP12270 2363 aaKnown RBP10.09□□□□□ -0.79
CCDC171-209ENST00000498725 A0A1B0GUA9 196 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 FAM205CA6NFA0 338 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 MAN2B1O00754 1011 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 HRO43593 1189 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 SLITRK3O94933 977 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 DEXIO95424 95 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 BAG4O95429 457 aaKnown RBP10.08□□□□□ -0.8
CCDC171-209ENST00000498725 GJA1P17302 382 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 FCARP24071 287 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 CCNE1P24864 410 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 ELF1P32519 619 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 ARL2P36404 184 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 VIPR2P41587 438 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 CXCL12P48061 93 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 CCR3P51677 355 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 ELAVL2Q12926 359 aaKnown RBP10.08□□□□□ -0.8
CCDC171-209ENST00000498725 SF3A2Q15428 464 aaKnown RBP10.08□□□□□ -0.8
CCDC171-209ENST00000498725 AASDHQ4L235 1098 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-209ENST00000498725 N4BP2L1Q5TBK1 243 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-209ENST00000498725 PPP4R3AQ6IN85 833 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 PDXDC1Q6P996 788 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-209ENST00000498725 PIK3AP1Q6ZUJ8 805 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 IFNLR1Q8IU57 520 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-209ENST00000498725 HS6ST3Q8IZP7 471 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 DAGLBQ8NCG7 672 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 TTC8Q8TAM2 541 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 DNASE1L2Q92874 299 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 PDZD7Q9H5P4 517 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 ZNF334Q9HCZ1 680 aaPredicted RBP10.08□□□□□ -0.8
CCDC171-209ENST00000498725 GJB4Q9NTQ9 266 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 GDE1Q9NZC3 331 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 MTRRQ9UBK8 725 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 ANGPTL2Q9UKU9 493 aa10.08□□□□□ -0.8
CCDC171-209ENST00000498725 N4BP3O15049 544 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 AXIN1O15169 862 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 CDC45O75419 566 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 B3GAT3O94766 335 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 PRKCBP05771 671 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 MYL4P12829 197 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 FGFR3P22607 806 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 CCR2P41597 374 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 SOX9P48436 509 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 CLCNKBP51801 687 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 POU5F1BQ06416 359 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 COL9A2Q14055 689 aaPredicted RBP10.07□□□□□ -0.8
CCDC171-209ENST00000498725 GAS6Q14393 721 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 NAB2Q15742 525 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 CSRP2Q16527 193 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 EEF1DP3Q658K8 133 aa10.07□□□□□ -0.8
CCDC171-209ENST00000498725 VITQ6UXI7 678 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms