RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 TTC7BQ86TV6 843 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 RSPH3Q86UC2 560 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 ANKRD13AQ8IZ07 590 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 CPA6Q8N4T0 437 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 OR10H5Q8NGA6 315 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 CCHCR1Q8TD31 782 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 PGBD4Q96DM1 585 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 SLC46A2Q9BY10 475 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 ZNF341Q9BYN7 854 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 CALCOCO1Q9P1Z2 691 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 IPPQ9Y573 584 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 FMN1Q68DA7 1419 aa6.22□□□□□ -1.41
SSR3-209ENST00000498205 MYBBP1AQ9BQG0 1328 aaKnown RBP6.22□□□□□ -1.41
SSR3-209ENST00000498205 PLSCR1O15162 318 aa6.21□□□□□ -1.42
SSR3-209ENST00000498205 HTRA2O43464 458 aaPredicted RBP6.21□□□□□ -1.42
SSR3-209ENST00000498205 HLA-DOAP06340 250 aa6.21□□□□□ -1.42
SSR3-209ENST00000498205 MAKP20794 623 aa6.21□□□□□ -1.42
SSR3-209ENST00000498205 AKAP5P24588 427 aa6.21□□□□□ -1.42
SSR3-209ENST00000498205 MCM7P33993 719 aa6.21□□□□□ -1.42
SSR3-209ENST00000498205 EPHB1P54762 984 aa6.21□□□□□ -1.42
SSR3-209ENST00000498205 MXRA7P84157 204 aa6.21□□□□□ -1.42
SSR3-209ENST00000498205 UAP1L1Q3KQV9 507 aa6.21□□□□□ -1.42
SSR3-209ENST00000498205 DACT2Q5SW24 774 aa6.21□□□□□ -1.42
SSR3-209ENST00000498205 PLXDC1Q8IUK5 500 aa6.21□□□□□ -1.42
SSR3-209ENST00000498205 CMTR2Q8IYT2 770 aaKnown RBP6.21□□□□□ -1.42
SSR3-209ENST00000498205 SYNE4Q8N205 404 aa6.21□□□□□ -1.42
SSR3-209ENST00000498205 OR2I1PQ8NGU4 316 aa6.21□□□□□ -1.42
SSR3-209ENST00000498205 SLC25A43Q8WUT9 341 aaPredicted RBP6.21□□□□□ -1.42
SSR3-209ENST00000498205 CAMKK2Q96RR4 588 aa6.21□□□□□ -1.42
SSR3-209ENST00000498205 SORCS3Q9UPU3 1222 aa6.21□□□□□ -1.42
SSR3-209ENST00000498205 POLHQ9Y253 713 aa6.21□□□□□ -1.42
SSR3-209ENST00000498205 LUC7L2Q9Y383 392 aaKnown RBP6.21□□□□□ -1.42
SSR3-209ENST00000498205 TOPBP1Q92547 1522 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 GRXCR1A8MXD5 290 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 SLC16A6O15403 523 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 SCAF4O95104 1147 aaKnown RBP6.2□□□□□ -1.42
SSR3-209ENST00000498205 ARIH2O95376 493 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 C1SP09871 688 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 GDF5P43026 501 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 ALDH1A3P47895 512 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 ZXDAP98168 799 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 ATP8B2P98198 1209 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 ANKS6Q68DC2 871 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 GDF7Q7Z4P5 450 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 SLC35B2Q8TB61 432 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 HAS1Q92839 578 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 HSPBAP1Q96EW2 488 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 AASDHPPTQ9NRN7 309 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 ANKRD6Q9Y2G4 727 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 POLA1P09884 1462 aaPredicted RBP6.2□□□□□ -1.42
SSR3-209ENST00000498205 CTTNBP2Q8WZ74 1663 aa6.2□□□□□ -1.42
SSR3-209ENST00000498205 SAMD9Q5K651 1589 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 AKNAQ7Z591 1439 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 SETD5Q9C0A6 1442 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 ABCA5Q8WWZ7 1642 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 CCDC154A6NI56 674 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 DRGXA6NNA5 263 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 RNASET2O00584 256 aaKnown RBP6.19□□□□□ -1.42
SSR3-209ENST00000498205 C6P13671 934 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 NHLH2Q02577 135 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 ABHD18Q0P651 414 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 UBXN2BQ14CS0 331 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 TTF1Q15361 905 aaPredicted RBP6.19□□□□□ -1.42
SSR3-209ENST00000498205 LCE5AQ5TCM9 118 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 ZNF276Q8N554 614 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 CPT1CQ8TCG5 803 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 ZNF483Q8TF39 744 aaPredicted RBP6.19□□□□□ -1.42
SSR3-209ENST00000498205 STAG1Q8WVM7 1258 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 DPF2Q92785 391 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 LENG9Q96B70 501 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 C11orf54Q9H0W9 315 aaPredicted RBP6.19□□□□□ -1.42
SSR3-209ENST00000498205 PNMA8BQ9ULN7 279 aaPredicted RBP6.19□□□□□ -1.42
SSR3-209ENST00000498205 FZD1Q9UP38 647 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 LIMCH1Q9UPQ0 1083 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 ATP11BQ9Y2G3 1177 aa6.19□□□□□ -1.42
SSR3-209ENST00000498205 CYR61O00622 381 aa6.18□□□□□ -1.42
SSR3-209ENST00000498205 ZRANB2O95218 330 aaKnown RBP eCLIP6.18□□□□□ -1.42
SSR3-209ENST00000498205 IL33O95760 270 aa6.18□□□□□ -1.42
SSR3-209ENST00000498205 AMY1AP04745 511 aa6.18□□□□□ -1.42
SSR3-209ENST00000498205 CT47B1P0C2W7 299 aaPredicted RBP6.18□□□□□ -1.42
SSR3-209ENST00000498205 U2AF1L5P0DN76 240 aaPredicted RBP6.18□□□□□ -1.42
SSR3-209ENST00000498205 MTHFD1P11586 935 aaKnown RBP6.18□□□□□ -1.42
SSR3-209ENST00000498205 PCSK1P29120 753 aa6.18□□□□□ -1.42
SSR3-209ENST00000498205 APOBEC3AP31941 199 aaPredicted RBP6.18□□□□□ -1.42
SSR3-209ENST00000498205 U2AF1Q01081 240 aaKnown RBP eCLIP6.18□□□□□ -1.422e-12■■■■□ 19.4
SSR3-209ENST00000498205 PIN1Q13526 163 aaPredicted RBP6.18□□□□□ -1.42
SSR3-209ENST00000498205 ODF1Q14990 250 aa6.18□□□□□ -1.42
SSR3-209ENST00000498205 RHOT2Q8IXI1 618 aa6.18□□□□□ -1.42
SSR3-209ENST00000498205 TRPM5Q9NZQ8 1165 aa6.18□□□□□ -1.42
SSR3-209ENST00000498205 ACTL7AQ9Y615 435 aa6.18□□□□□ -1.42
SSR3-209ENST00000498205 MAPKBP1O60336 1514 aa6.18□□□□□ -1.42
SSR3-209ENST00000498205 SNAPC4Q5SXM2 1469 aa6.17□□□□□ -1.42
SSR3-209ENST00000498205 ITGB1P05556 798 aa6.17□□□□□ -1.42
SSR3-209ENST00000498205 FTH1P19P0C7X4 201 aa6.17□□□□□ -1.42
SSR3-209ENST00000498205 ZSCAN20P17040 1043 aaPredicted RBP6.17□□□□□ -1.42
SSR3-209ENST00000498205 LAG3P18627 525 aa6.17□□□□□ -1.42
SSR3-209ENST00000498205 EDNRBP24530 442 aa6.17□□□□□ -1.42
SSR3-209ENST00000498205 RAP2BP61225 183 aa6.17□□□□□ -1.42
SSR3-209ENST00000498205 PABPC1LQ4VXU2 614 aaKnown RBP6.17□□□□□ -1.42
SSR3-209ENST00000498205 FAM102AQ5T9C2 384 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms