RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 IL10RAQ13651 578 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 TUBA3CQ13748 450 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 LSM12Q3MHD2 195 aaKnown RBP3.77□□□□□ -1.81
RIF1-212ENST00000498041 TUBA3EQ6PEY2 450 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 SEM1Q6ZVN7 128 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 SYT12Q8IV01 421 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 RNF169Q8NCN4 708 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 CPT1CQ8TCG5 803 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 HSPBAP1Q96EW2 488 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 TMX3Q96JJ7 454 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 PCED1AQ9H1Q7 454 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 RUVBL1Q9Y265 456 aaKnown RBP3.77□□□□□ -1.81
RIF1-212ENST00000498041 ANKRD6Q9Y2G4 727 aa3.77□□□□□ -1.81
RIF1-212ENST00000498041 CFAP20Q9Y6A4 193 aaKnown RBP3.77□□□□□ -1.81
RIF1-212ENST00000498041 DCAF1Q9Y4B6 1507 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 DTNBO60941 627 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 ABLIM3O94929 683 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 CT47B1P0C2W7 299 aaPredicted RBP3.76□□□□□ -1.81
RIF1-212ENST00000498041 ALAS1P13196 640 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 PDCP20941 246 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 TGM1P22735 817 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 AKAP5P24588 427 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 CHN2P52757 468 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 EPHB1P54762 984 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 RNASE9P60153 205 aaKnown RBP3.76□□□□□ -1.81
RIF1-212ENST00000498041 SLC25A3Q00325 362 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 CREMQ03060 361 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 FHL2Q14192 279 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 RAB39AQ14964 217 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 UBXN2BQ14CS0 331 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 PLEKHG6Q3KR16 790 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 ZNF529Q6P280 563 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 GDF7Q7Z4P5 450 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 TTC7BQ86TV6 843 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 PLXDC1Q8IUK5 500 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 ZNF276Q8N554 614 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 IFI44Q8TCB0 444 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 SLC25A43Q8WUT9 341 aaPredicted RBP3.76□□□□□ -1.81
RIF1-212ENST00000498041 KAT5Q92993 513 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 CLPTM1LQ96KA5 538 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 PHACTR3Q96KR7 559 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 NUP88Q99567 741 aaPredicted RBP3.76□□□□□ -1.81
RIF1-212ENST00000498041 MYOCQ99972 504 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 SLC46A2Q9BY10 475 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 TRPM5Q9NZQ8 1165 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 CALCOCO1Q9P1Z2 691 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 IP6K2Q9UHH9 426 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 SLC23A1Q9UHI7 598 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 PCDHB1Q9Y5F3 818 aa3.76□□□□□ -1.81
RIF1-212ENST00000498041 AHRRA9YTQ3 701 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 NPIPB8E9PQR5 432 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 PPFIA4O75335 1185 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 POU2F2P09086 479 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 SPATA31D3P0C874 917 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 PF4V1P10720 104 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 ZSCAN20P17040 1043 aaPredicted RBP3.75□□□□□ -1.81
RIF1-212ENST00000498041 PTGS2P35354 604 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 PTTG1IPP53801 180 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 PIN1Q13526 163 aaPredicted RBP3.75□□□□□ -1.81
RIF1-212ENST00000498041 DACT2Q5SW24 774 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 ODR4Q5SWX8 454 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 FAM102AQ5T9C2 384 aaPredicted RBP3.75□□□□□ -1.81
RIF1-212ENST00000498041 METRNLQ641Q3 311 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 GADL1Q6ZQY3 521 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 SPATA31D4Q6ZUB0 917 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 MED25Q71SY5 747 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 UBE3BQ7Z3V4 1068 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 PRR18Q8N4B5 295 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 NLGN4YQ8NFZ3 816 aaPredicted RBP3.75□□□□□ -1.81
RIF1-212ENST00000498041 NSUN6Q8TEA1 469 aaKnown RBP3.75□□□□□ -1.81
RIF1-212ENST00000498041 RAB24Q969Q5 203 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 MRGPRX4Q96LA9 322 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 CAMKK2Q96RR4 588 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 REXO4Q9GZR2 422 aaKnown RBP3.75□□□□□ -1.81
RIF1-212ENST00000498041 C11orf54Q9H0W9 315 aaPredicted RBP3.75□□□□□ -1.81
RIF1-212ENST00000498041 MAN1C1Q9NR34 630 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 C11orf21Q9P2W6 132 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 REXO2Q9Y3B8 237 aaKnown RBP3.75□□□□□ -1.81
RIF1-212ENST00000498041 CHST2Q9Y4C5 530 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 RSF1Q96T23 1441 aaPredicted RBP3.75□□□□□ -1.81
RIF1-212ENST00000498041 NACADO15069 1562 aa3.75□□□□□ -1.81
RIF1-212ENST00000498041 TCRBV7S2A1N4TA0A589 114 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 GAGE12BA1L429 117 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 GAGE12HA6NDE8 117 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 RNASET2O00584 256 aaKnown RBP3.74□□□□□ -1.81
RIF1-212ENST00000498041 KIAA0391O15091 583 aaKnown RBP3.74□□□□□ -1.81
RIF1-212ENST00000498041 ZNF185O15231 689 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 AKAP10O43572 662 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 RPS6KA4O75676 772 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 ZNF202O95125 648 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 S100BP04271 92 aaPredicted RBP3.74□□□□□ -1.81
RIF1-212ENST00000498041 MTHFD1P11586 935 aaKnown RBP3.74□□□□□ -1.81
RIF1-212ENST00000498041 RAB27AP51159 221 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 ZNF280AP59817 542 aaPredicted RBP3.74□□□□□ -1.81
RIF1-212ENST00000498041 DSC2Q02487 901 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 TLE1Q04724 770 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 PABPC1LQ4VXU2 614 aaKnown RBP3.74□□□□□ -1.81
RIF1-212ENST00000498041 PDCD4Q53EL6 469 aaKnown RBP3.74□□□□□ -1.81
RIF1-212ENST00000498041 THEMIS2Q5TEJ8 643 aa3.74□□□□□ -1.81
RIF1-212ENST00000498041 FNDC7Q5VTL7 733 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms