RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 SEPT14Q6ZU15 432 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 MMP19Q99542 508 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 YIPF2Q9BWQ6 316 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 PCIF1Q9H4Z3 704 aa12.42□□□□□ -0.42
SNRNP200-208ENST00000497539 EXTL3O43909 919 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 HEXIM1O94992 359 aaKnown RBP12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 SLC26A2P50443 739 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 POLGP54098 1239 aaPredicted RBP12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 KIAA0753Q2KHM9 967 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 CELF3Q5SZQ8 465 aaKnown RBP12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 RNF187Q5TA31 235 aaPredicted RBP12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 MEI1Q5TIA1 1274 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 KRT39Q6A163 491 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 ALKBH5Q6P6C2 394 aaKnown RBP12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 SLFN11Q7Z7L1 901 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 LNX1Q8TBB1 728 aaPredicted RBP12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 C17orf50Q8WW18 174 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 KRT12Q99456 494 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 SH2D3AQ9BRG2 576 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 IGKV6-21A0A0C4DH24 114 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 TMEM253P0C7T8 217 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 GLRA2P23416 452 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 HADHBP55084 474 aaKnown RBP12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 MTERF2Q49AM1 385 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 ALS2CLQ60I27 953 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 SLFN12LQ6IEE8 588 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 EMBQ6PCB8 327 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 MOB2Q70IA6 237 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 DNAAF5Q86Y56 855 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 CBWD2Q8IUF1 395 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 ABRAQ8N0Z2 381 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 LRRC57Q8N9N7 239 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 C3orf20Q8ND61 904 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 ASAP3Q8TDY4 903 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 GPR20Q99678 358 aa12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 JPH2Q9BR39 696 aaPredicted RBP12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNRNP200-208ENST00000497539 GRID2IPA4D2P6 1211 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 PYGLP06737 847 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 HPDP32754 393 aaPredicted RBP12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 LSP1P33241 339 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 ERVK-9P63128 1117 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 KCTD2Q14681 263 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 PSMD6Q15008 389 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 ARMC3Q5W041 872 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 CDCA2Q69YH5 1023 aaPredicted RBP12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 ZNF467Q7Z7K2 595 aaPredicted RBP12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 PAGR1Q9BTK6 254 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 KIFC3Q9BVG8 833 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 HOMER3Q9NSC5 361 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 MORF4L1Q9UBU8 362 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 DIS3Q9Y2L1 958 aaKnown RBP12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 ASB14A6NK59 587 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 KIAA0754O94854 1291 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 H2AFZP0C0S5 128 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 STAT5BP51692 787 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 SKOR1P84550 965 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 SNX1Q13596 522 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 Q3C1V9 767 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 WLSQ5T9L3 541 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 H2AFVQ71UI9 128 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 ENOSF1Q7L5Y1 443 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 KLHL7Q8IXQ5 586 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 FAM71AQ8IYT1 594 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 ZSWIM2Q8NEG5 633 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 PSPC1Q8WXF1 523 aaKnown RBP12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 SLC7A3Q8WY07 619 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 ADGRA2Q96PE1 1338 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 PACSIN1Q9BY11 444 aa12.4□□□□□ -0.42
SNRNP200-208ENST00000497539 PEX10O60683 326 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 PALMO75781 387 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 GGPS1O95749 300 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 ZBTB48P10074 688 aaPredicted RBP12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 GCLMP48507 274 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 GRM1Q13255 1194 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 TTLL12Q14166 644 aaPredicted RBP12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 ZPBP2Q6X784 338 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 ARHGEF19Q8IW93 802 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 IQCKQ8N0W5 287 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 OR2W6PQ8NHA6 318 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 CASKIN2Q8WXE0 1202 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 SHC3Q92529 594 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 CCDC113Q9H0I3 377 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 GOLPH3Q9H4A6 298 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 A0A1B0GUA9 196 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 GRIN3BO60391 1043 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 RTN3O95197 1032 aaPredicted RBP12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 ARIH2O95376 493 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 CETPP11597 493 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 TCF7P36402 384 aaPredicted RBP12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 SOX10P56693 466 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 IER5Q5VY09 327 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 NAA35Q5VZE5 725 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 MAATS1Q7Z4T9 603 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 TRIM42Q8IWZ5 723 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 IFT20Q8IY31 132 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 ATP8B4Q8TF62 1192 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 DHX38Q92620 1227 aaKnown RBP12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 CAVIN3Q969G5 261 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 PPANQ9NQ55 473 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms