RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 FCRLBQ6BAA4 426 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 SLC30A9Q6PML9 568 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 PPP1R21Q6ZMI0 780 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 THAP5Q7Z6K1 395 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 LRRTM3Q86VH5 581 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 NLRP10Q86W26 655 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 IRF2BP1Q8IU81 584 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 CCDC83Q8IWF9 413 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 FAM9CQ8IZT9 166 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 ZNF655Q8N720 491 aaPredicted RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 BBOF1Q8ND07 529 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 GIMAP5Q96F15 307 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 CNDP2Q96KP4 475 aaKnown RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 FNBP1Q96RU3 617 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 TUBA1CQ9BQE3 449 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 PARD6BQ9BYG5 372 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 GLT8D2Q9H1C3 349 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 DNAJC18Q9H819 358 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 BRD9Q9H8M2 597 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 PCDH18Q9HCL0 1135 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 BATF3Q9NR55 127 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 OBP2AQ9NY56 170 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 DUSP12Q9UNI6 340 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 SATB2Q9UPW6 733 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 GMEB1Q9Y692 573 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 A0A087WUV0 522 aaPredicted RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 EIF3CLB5ME19 914 aaKnown RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 K7ENM7 598 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 ZEB2O60315 1214 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 DDHD2O94830 711 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 SNX4O95219 450 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 BAG2O95816 211 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 GUCA1CO95843 209 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 OLFM2O95897 454 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 KRT1P04264 644 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 PSMA4P25789 261 aaKnown RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 PMLP29590 882 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 PRKAR1BP31321 381 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 HTR3AP46098 478 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 ASMTP46597 345 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 CLNS1AP54105 237 aaKnown RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 EPHB3P54753 998 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 INHBCP55103 352 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 C21orf58P58505 322 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 B2MP61769 119 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 NCBP1Q09161 790 aaKnown RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 KLHL30Q0D2K2 578 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 TMEM62Q0P6H9 643 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 SCRN1Q12765 414 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 MTMR1Q13613 665 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 OASLQ15646 514 aaKnown RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 CRY1Q16526 586 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 TRIM71Q2Q1W2 868 aaKnown RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 DACT2Q5SW24 774 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 DENND5AQ6IQ26 1287 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 KDELC1Q6UW63 502 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 B4GALNT4Q76KP1 1039 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 OSTM1Q86WC4 334 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 THNSL2Q86YJ6 484 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 TCEAL8Q8IYN2 117 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 CCDC170Q8IYT3 715 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 TBC1D21Q8IYX1 336 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 LSMEM2Q8N112 164 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 NAT16Q8N8M0 369 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 SYT2Q8N9I0 419 aaPredicted RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 ZBTB8BQ8NAP8 495 aaPredicted RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 SYTL5Q8TDW5 730 aaPredicted RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 ZFAND2BQ8WV99 257 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 CCT6BQ92526 530 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 GTF3C6Q969F1 213 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 PPP2R3CQ969Q6 453 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 SDCCAG3Q96C92 435 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 KIF1BPQ96EK5 621 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 CNDP1Q96KN2 507 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 SAMD11Q96NU1 681 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 STRBPQ96SI9 672 aaKnown RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 EIF3CQ99613 913 aaKnown RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 CCT7Q99832 543 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 YIPF4Q9BSR8 244 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 SARGQ9BW04 601 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 KATNAL1Q9BW62 490 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 SERHL2Q9H4I8 314 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 VPS37BQ9H9H4 285 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 CLK4Q9HAZ1 481 aaKnown RBP3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 CLEC1BQ9P126 229 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 EDARQ9UNE0 448 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 AGTPBP1Q9UPW5 1226 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 TMX2Q9Y320 296 aa3.37□□□□□ -1.87
SNRNP48-202ENST00000496946 ARAP1Q96P48 1450 aa3.36□□□□□ -1.87
SNRNP48-202ENST00000496946 CYP2D7A0A087X1C5 515 aa3.36□□□□□ -1.87
SNRNP48-202ENST00000496946 J3KRW8 73 aa3.36□□□□□ -1.87
SNRNP48-202ENST00000496946 FYB1O15117 783 aa3.36□□□□□ -1.87
SNRNP48-202ENST00000496946 NCAM2O15394 837 aa3.36□□□□□ -1.87
SNRNP48-202ENST00000496946 ZBTB14O43829 449 aa3.36□□□□□ -1.87
SNRNP48-202ENST00000496946 ITGAVP06756 1048 aa3.36□□□□□ -1.87
SNRNP48-202ENST00000496946 LCP1P13796 627 aa3.36□□□□□ -1.87
SNRNP48-202ENST00000496946 GPTP24298 496 aa3.36□□□□□ -1.87
SNRNP48-202ENST00000496946 FPR2P25090 351 aa3.36□□□□□ -1.87
SNRNP48-202ENST00000496946 RAD52P43351 418 aa3.36□□□□□ -1.87
SNRNP48-202ENST00000496946 KPNA1P52294 538 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms