RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 CUL4BQ13620 913 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 BMS1Q14692 1282 aaKnown RBP6.64□□□□□ -1.35
HMGCL-206ENST00000496907 KNOP1Q1ED39 458 aaKnown RBP6.64□□□□□ -1.35
HMGCL-206ENST00000496907 BMT2Q1RMZ1 405 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 PUS10Q3MIT2 529 aaKnown RBP6.64□□□□□ -1.35
HMGCL-206ENST00000496907 KMT5BQ4FZB7 885 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 ZNF658Q5TYW1 1059 aaPredicted RBP6.64□□□□□ -1.35
HMGCL-206ENST00000496907 MPZL3Q6UWV2 235 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 ECHDC2Q86YB7 292 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 NT5DC4Q86YG4 428 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 CMTR2Q8IYT2 770 aaKnown RBP6.64□□□□□ -1.35
HMGCL-206ENST00000496907 ADSSL1Q8N142 457 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 GUF1Q8N442 669 aaKnown RBP6.64□□□□□ -1.35
HMGCL-206ENST00000496907 MLKLQ8NB16 471 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 URGCPQ8TCY9 931 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 BSNDQ8WZ55 320 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 STAMQ92783 540 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 ZBTB10Q96DT7 871 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 ACAP3Q96P50 834 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 KCNK17Q96T54 332 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 TSG101Q99816 390 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 STRA6Q9BX79 667 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 TMEM117Q9H0C3 514 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 GBP3Q9H0R5 595 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 NUP62CLQ9H1M0 184 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 GOLPH3LQ9H4A5 285 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 IGSF5Q9NSI5 407 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 SLC38A7Q9NVC3 462 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 LMCD1Q9NZU5 365 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 KIAA1468Q9P260 1216 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 PCDHB2Q9Y5E7 798 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 PCDHA5Q9Y5H7 936 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 STYXL1Q9Y6J8 313 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 CEP250Q9BV73 2442 aa6.64□□□□□ -1.35
HMGCL-206ENST00000496907 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.63□□□□□ -1.35
HMGCL-206ENST00000496907 GOLGA8CPA6NN73 597 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 PSMA7O14818 248 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 OGTO15294 1046 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 GADD45BO75293 160 aaPredicted RBP6.63□□□□□ -1.35
HMGCL-206ENST00000496907 DGKIO75912 1065 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 IL18RAPO95256 599 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 ALDH2P05091 517 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 LIG1P18858 919 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 PROZP22891 400 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 NMT1P30419 496 aaKnown RBP6.63□□□□□ -1.35
HMGCL-206ENST00000496907 GRM5P41594 1212 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 AP3M2P53677 418 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 HTRA4P83105 476 aaPredicted RBP6.63□□□□□ -1.35
HMGCL-206ENST00000496907 ENPEPQ07075 957 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 NFIL3Q16649 462 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 AMHR2Q16671 573 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 ZNF568Q3ZCX4 644 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 FAM117BQ6P1L5 589 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 EPM2AIP1Q7L775 607 aaPredicted RBP6.63□□□□□ -1.35
HMGCL-206ENST00000496907 RTN4RL1Q86UN2 441 aaPredicted RBP6.63□□□□□ -1.35
HMGCL-206ENST00000496907 SLC9A9Q8IVB4 645 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 C12orf56Q8IXR9 622 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 ZNF454Q8N9F8 522 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 LRRC15Q8TF66 581 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 CACTINQ8WUQ7 758 aaKnown RBP6.63□□□□□ -1.35
HMGCL-206ENST00000496907 POMGNT1Q8WZA1 660 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 PBXIP1Q96AQ6 731 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 DHTKD1Q96HY7 919 aaPredicted RBP6.63□□□□□ -1.35
HMGCL-206ENST00000496907 FAM193BQ96PV7 902 aaPredicted RBP6.63□□□□□ -1.35
HMGCL-206ENST00000496907 TGS1Q96RS0 853 aaKnown RBP6.63□□□□□ -1.35
HMGCL-206ENST00000496907 FIZ1Q96SL8 496 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 PPP1R16BQ96T49 567 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 YME1L1Q96TA2 773 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 TARS2Q9BW92 718 aaKnown RBP6.63□□□□□ -1.35
HMGCL-206ENST00000496907 PLVAPQ9BX97 442 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 BLZF1Q9H2G9 400 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 TMX1Q9H3N1 280 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 CLSTN2Q9H4D0 955 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 ASB7Q9H672 318 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 MINDY3Q9H8M7 445 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 PTPRHQ9HD43 1115 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 FAM50BQ9Y247 325 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 DERAQ9Y315 318 aa6.63□□□□□ -1.35
HMGCL-206ENST00000496907 MYH9P35579 1960 aaKnown RBP6.62□□□□□ -1.35
HMGCL-206ENST00000496907 FRYLO94915 3013 aa6.62□□□□□ -1.35
HMGCL-206ENST00000496907 A0A0B4J269 797 aa6.62□□□□□ -1.35
HMGCL-206ENST00000496907 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.62□□□□□ -1.35
HMGCL-206ENST00000496907 ARHGEF37A1IGU5 675 aa6.62□□□□□ -1.35
HMGCL-206ENST00000496907 ZNF233A6NK53 670 aa6.62□□□□□ -1.35
HMGCL-206ENST00000496907 MAPK13O15264 365 aa6.62□□□□□ -1.35
HMGCL-206ENST00000496907 INPPL1O15357 1258 aa6.62□□□□□ -1.35
HMGCL-206ENST00000496907 KLRC4O43908 158 aa6.62□□□□□ -1.35
HMGCL-206ENST00000496907 CSDE1O75534 798 aaKnown RBP6.62□□□□□ -1.35
HMGCL-206ENST00000496907 CAVIN2O95810 425 aa6.62□□□□□ -1.35
HMGCL-206ENST00000496907 GNA14O95837 355 aa6.62□□□□□ -1.35
HMGCL-206ENST00000496907 THP07101 528 aa6.62□□□□□ -1.35
HMGCL-206ENST00000496907 ALDH7A1P49419 539 aaKnown RBP6.62□□□□□ -1.35
HMGCL-206ENST00000496907 FKBP3Q00688 224 aaKnown RBP6.62□□□□□ -1.35
HMGCL-206ENST00000496907 KRT17Q04695 432 aa6.62□□□□□ -1.35
HMGCL-206ENST00000496907 ZP2Q05996 745 aa6.62□□□□□ -1.35
HMGCL-206ENST00000496907 LRRC63Q05C16 580 aa6.62□□□□□ -1.35
HMGCL-206ENST00000496907 STK4Q13043 487 aa6.62□□□□□ -1.35
HMGCL-206ENST00000496907 PNOCQ13519 176 aa6.62□□□□□ -1.35
HMGCL-206ENST00000496907 BTG3Q14201 252 aaPredicted RBP6.62□□□□□ -1.35
HMGCL-206ENST00000496907 NOLC1Q14978 699 aaKnown RBP eCLIP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms