RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 UBXN2BQ14CS0 331 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 UAP1L1Q3KQV9 507 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 FAM102AQ5T9C2 384 aaPredicted RBP6.41□□□□□ -1.38
SNX13-211ENST00000496855 METRNLQ641Q3 311 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 ZNF529Q6P280 563 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 TMED8Q6PL24 325 aaPredicted RBP6.41□□□□□ -1.38
SNX13-211ENST00000496855 HAS1Q92839 578 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 RIPOR2Q9Y4F9 1068 aa6.41□□□□□ -1.38
SNX13-211ENST00000496855 LOC102724159A0A0B4J2E5 919 aa6.4□□□□□ -1.39
SNX13-211ENST00000496855 ZNF185O15231 689 aa6.4□□□□□ -1.39
SNX13-211ENST00000496855 SGTAO43765 313 aa6.4□□□□□ -1.39
SNX13-211ENST00000496855 PARNO95453 639 aaKnown RBP6.4□□□□□ -1.39
SNX13-211ENST00000496855 PDGFRBP09619 1106 aa6.4□□□□□ -1.39
SNX13-211ENST00000496855 FAM189BP81408 668 aa6.4□□□□□ -1.39
SNX13-211ENST00000496855 PWP2Q15269 919 aaKnown RBP6.4□□□□□ -1.39
SNX13-211ENST00000496855 TMEM240Q5SV17 173 aa6.4□□□□□ -1.39
SNX13-211ENST00000496855 RSPH3Q86UC2 560 aa6.4□□□□□ -1.39
SNX13-211ENST00000496855 PLXDC1Q8IUK5 500 aa6.4□□□□□ -1.39
SNX13-211ENST00000496855 CMTR2Q8IYT2 770 aaKnown RBP6.4□□□□□ -1.39
SNX13-211ENST00000496855 MIER2Q8N344 545 aa6.4□□□□□ -1.39
SNX13-211ENST00000496855 RAB24Q969Q5 203 aa6.4□□□□□ -1.39
SNX13-211ENST00000496855 LENG9Q96B70 501 aa6.4□□□□□ -1.39
SNX13-211ENST00000496855 CLIP3Q96DZ5 547 aa6.4□□□□□ -1.39
SNX13-211ENST00000496855 TMX3Q96JJ7 454 aa6.4□□□□□ -1.39
SNX13-211ENST00000496855 NEU1Q99519 415 aa6.4□□□□□ -1.39
SNX13-211ENST00000496855 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.4□□□□□ -1.39
SNX13-211ENST00000496855 FZD1Q9UP38 647 aa6.4□□□□□ -1.39
SNX13-211ENST00000496855 CYR61O00622 381 aa6.39□□□□□ -1.39
SNX13-211ENST00000496855 AKAP8O43823 692 aaKnown RBP6.39□□□□□ -1.39
SNX13-211ENST00000496855 CTXN1P60606 82 aa6.39□□□□□ -1.39
SNX13-211ENST00000496855 PDCD4Q53EL6 469 aaKnown RBP6.39□□□□□ -1.39
SNX13-211ENST00000496855 AGAP9Q5VTM2 703 aa6.39□□□□□ -1.39
SNX13-211ENST00000496855 PPP4R3AQ6IN85 833 aa6.39□□□□□ -1.39
SNX13-211ENST00000496855 MED25Q71SY5 747 aa6.39□□□□□ -1.39
SNX13-211ENST00000496855 RHOUQ7L0Q8 258 aa6.39□□□□□ -1.39
SNX13-211ENST00000496855 UBE3BQ7Z3V4 1068 aa6.39□□□□□ -1.39
SNX13-211ENST00000496855 CPA6Q8N4T0 437 aa6.39□□□□□ -1.39
SNX13-211ENST00000496855 PHACTR3Q96KR7 559 aa6.39□□□□□ -1.39
SNX13-211ENST00000496855 TEX101Q9BY14 249 aa6.39□□□□□ -1.39
SNX13-211ENST00000496855 KRTAP4-2Q9BYR5 136 aa6.39□□□□□ -1.39
SNX13-211ENST00000496855 FBXO34Q9NWN3 711 aa6.39□□□□□ -1.39
SNX13-211ENST00000496855 LUC7L2Q9Y383 392 aaKnown RBP6.39□□□□□ -1.39
SNX13-211ENST00000496855 USP15Q9Y4E8 981 aaPredicted RBP6.39□□□□□ -1.39
SNX13-211ENST00000496855 GAGE12BA1L429 117 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 GAGE12HA6NDE8 117 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 RNASET2O00584 256 aaKnown RBP6.38□□□□□ -1.39
SNX13-211ENST00000496855 ALDH1L1O75891 902 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 SPATA31D3P0C874 917 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 ZFP36P26651 326 aaKnown RBP6.38□□□□□ -1.39
SNX13-211ENST00000496855 CREMQ03060 361 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 ATP2B3Q16720 1220 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 DACT2Q5SW24 774 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 SPATA31D4Q6ZUB0 917 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 MRGPREQ86SM8 312 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 RHOT2Q8IXI1 618 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 SYNE4Q8N205 404 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 IFI44Q8TCB0 444 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 KAT5Q92993 513 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 CEP89Q96ST8 783 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 C11orf54Q9H0W9 315 aaPredicted RBP6.38□□□□□ -1.39
SNX13-211ENST00000496855 AKIP1Q9NQ31 210 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 SRRDQ9UH36 339 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 PCDHB1Q9Y5F3 818 aa6.38□□□□□ -1.39
SNX13-211ENST00000496855 PPFIA4O75335 1185 aa6.37□□□□□ -1.39
SNX13-211ENST00000496855 NCR1O76036 304 aa6.37□□□□□ -1.39
SNX13-211ENST00000496855 RPLP2P05387 115 aaKnown RBP6.37□□□□□ -1.39
SNX13-211ENST00000496855 ITGB1P05556 798 aa6.37□□□□□ -1.39
SNX13-211ENST00000496855 ADH4P08319 380 aa6.37□□□□□ -1.39
SNX13-211ENST00000496855 ALAS1P13196 640 aa6.37□□□□□ -1.39
SNX13-211ENST00000496855 LAG3P18627 525 aa6.37□□□□□ -1.39
SNX13-211ENST00000496855 RAB39AQ14964 217 aa6.37□□□□□ -1.39
SNX13-211ENST00000496855 LRRC55Q6ZSA7 311 aa6.37□□□□□ -1.39
SNX13-211ENST00000496855 ZFPM1Q8IX07 1006 aa6.37□□□□□ -1.39
SNX13-211ENST00000496855 DCBLD1Q8N8Z6 715 aa6.37□□□□□ -1.39
SNX13-211ENST00000496855 MYEOVQ96EZ4 313 aa6.37□□□□□ -1.39
SNX13-211ENST00000496855 MRGPRX4Q96LA9 322 aa6.37□□□□□ -1.39
SNX13-211ENST00000496855 AASDHPPTQ9NRN7 309 aa6.37□□□□□ -1.39
SNX13-211ENST00000496855 ATP11BQ9Y2G3 1177 aa6.37□□□□□ -1.39
SNX13-211ENST00000496855 CFAP20Q9Y6A4 193 aaKnown RBP6.37□□□□□ -1.39
SNX13-211ENST00000496855 TCRBV7S2A1N4TA0A589 114 aa6.36□□□□□ -1.39
SNX13-211ENST00000496855 SLC6A2P23975 617 aa6.36□□□□□ -1.39
SNX13-211ENST00000496855 KLF10Q13118 480 aa6.36□□□□□ -1.39
SNX13-211ENST00000496855 TIGD2Q4W5G0 525 aa6.36□□□□□ -1.39
SNX13-211ENST00000496855 TSHZ3Q63HK5 1081 aa6.36□□□□□ -1.39
SNX13-211ENST00000496855 OR56A1Q8NGH5 318 aa6.36□□□□□ -1.39
SNX13-211ENST00000496855 HOOK2Q96ED9 719 aa6.36□□□□□ -1.39
SNX13-211ENST00000496855 CLPTM1LQ96KA5 538 aa6.36□□□□□ -1.39
SNX13-211ENST00000496855 DMRTA2Q96SC8 542 aa6.36□□□□□ -1.39
SNX13-211ENST00000496855 REXO4Q9GZR2 422 aaKnown RBP6.36□□□□□ -1.39
SNX13-211ENST00000496855 PCED1AQ9H1Q7 454 aa6.36□□□□□ -1.39
SNX13-211ENST00000496855 TCF7L1Q9HCS4 588 aa6.36□□□□□ -1.39
SNX13-211ENST00000496855 KLHL11Q9NVR0 708 aa6.36□□□□□ -1.39
SNX13-211ENST00000496855 PLEKHD1A6NEE1 506 aa6.35□□□□□ -1.39
SNX13-211ENST00000496855 KIAA0391O15091 583 aaKnown RBP6.35□□□□□ -1.39
SNX13-211ENST00000496855 GCSHP23434 173 aa6.35□□□□□ -1.39
SNX13-211ENST00000496855 TTF1Q15361 905 aaPredicted RBP6.35□□□□□ -1.39
SNX13-211ENST00000496855 BEAN1Q3B7T3 259 aa6.35□□□□□ -1.39
SNX13-211ENST00000496855 TTC7BQ86TV6 843 aa6.35□□□□□ -1.39
SNX13-211ENST00000496855 NSUN6Q8TEA1 469 aaKnown RBP6.35□□□□□ -1.39
SNX13-211ENST00000496855 NEU4Q8WWR8 484 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms