RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 ACSF2Q96CM8 615 aaPredicted RBP16.52■□□□□ 0.24
NEK4-206ENST00000496822 UROC1Q96N76 676 aa16.52■□□□□ 0.24
NEK4-206ENST00000496822 RHOBTB2Q9BYZ6 727 aa16.52■□□□□ 0.24
NEK4-206ENST00000496822 HAPLN2Q9GZV7 340 aa16.52■□□□□ 0.24
NEK4-206ENST00000496822 ZDHHC7Q9NXF8 308 aa16.52■□□□□ 0.24
NEK4-206ENST00000496822 KCND2Q9NZV8 630 aa16.52■□□□□ 0.24
NEK4-206ENST00000496822 CNTN3Q9P232 1028 aa16.52■□□□□ 0.24
NEK4-206ENST00000496822 CLIC4Q9Y696 253 aa16.52■□□□□ 0.24
NEK4-206ENST00000496822 SLC26A4O43511 780 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 TOM1L1O75674 476 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 ZMYND10O75800 440 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 BMP15O95972 392 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 C1RP00736 705 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 KCNE1P15382 129 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 HOXD11P31277 338 aaPredicted RBP16.51■□□□□ 0.23
NEK4-206ENST00000496822 LONP1P36776 959 aaKnown RBP16.51■□□□□ 0.23
NEK4-206ENST00000496822 UBA7P41226 1012 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 SMTNP53814 917 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 NHLH1Q02575 133 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 MCM6Q14566 821 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 FAM173BQ6P4H8 233 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 DCLRE1AQ6PJP8 1040 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 CYP26C1Q6V0L0 522 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 UBALD2Q8IYN6 164 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 CALML4Q96GE6 196 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 DDX27Q96GQ7 796 aaKnown RBP16.51■□□□□ 0.23
NEK4-206ENST00000496822 ACAP3Q96P50 834 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 MYADMQ96S97 322 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 PRKD2Q9BZL6 878 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 KCNH6Q9H252 994 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 MTRRQ9UBK8 725 aa16.51■□□□□ 0.23
NEK4-206ENST00000496822 DAXXQ9UER7 740 aaPredicted RBP16.51■□□□□ 0.23
NEK4-206ENST00000496822 PODXLO00592 558 aa16.5■□□□□ 0.23
NEK4-206ENST00000496822 GBP2P32456 591 aaPredicted RBP16.5■□□□□ 0.23
NEK4-206ENST00000496822 MCL1Q07820 350 aa16.5■□□□□ 0.23
NEK4-206ENST00000496822 PTPAQ15257 358 aa16.5■□□□□ 0.23
NEK4-206ENST00000496822 SLC10A6Q3KNW5 377 aa16.5■□□□□ 0.23
NEK4-206ENST00000496822 SPECC1Q5M775 1068 aa16.5■□□□□ 0.23
NEK4-206ENST00000496822 ZPBP2Q6X784 338 aa16.5■□□□□ 0.23
NEK4-206ENST00000496822 USP49Q70CQ1 688 aa16.5■□□□□ 0.23
NEK4-206ENST00000496822 RAD54LQ92698 747 aa16.5■□□□□ 0.23
NEK4-206ENST00000496822 KCNK12Q9HB15 430 aa16.5■□□□□ 0.23
NEK4-206ENST00000496822 PIDD1Q9HB75 910 aa16.5■□□□□ 0.23
NEK4-206ENST00000496822 FOXD4L1Q9NU39 408 aa16.5■□□□□ 0.23
NEK4-206ENST00000496822 LARSQ9P2J5 1176 aaKnown RBP16.5■□□□□ 0.23
NEK4-206ENST00000496822 ODF2LQ9ULJ1 636 aa16.5■□□□□ 0.23
NEK4-206ENST00000496822 ZDBF2Q9HCK1 2354 aa16.5■□□□□ 0.23
NEK4-206ENST00000496822 TRIP11Q15643 1979 aa16.49■□□□□ 0.23
NEK4-206ENST00000496822 K7ENM7 598 aa16.49■□□□□ 0.23
NEK4-206ENST00000496822 C8AP07357 584 aa16.49■□□□□ 0.23
NEK4-206ENST00000496822 CXCL8P10145 99 aa16.49■□□□□ 0.23
NEK4-206ENST00000496822 PDCP20941 246 aa16.49■□□□□ 0.23
NEK4-206ENST00000496822 SYT1P21579 422 aa16.49■□□□□ 0.23
NEK4-206ENST00000496822 MARCKSP29966 332 aaPredicted RBP16.49■□□□□ 0.23
NEK4-206ENST00000496822 OR1D2P34982 312 aa16.49■□□□□ 0.23
NEK4-206ENST00000496822 NTHL1P78549 312 aa16.49■□□□□ 0.23
NEK4-206ENST00000496822 LIN9Q5TKA1 542 aa16.49■□□□□ 0.23
NEK4-206ENST00000496822 GET4Q7L5D6 327 aaPredicted RBP16.49■□□□□ 0.23
NEK4-206ENST00000496822 HAUS6Q7Z4H7 955 aa16.49■□□□□ 0.23
NEK4-206ENST00000496822 RASSF8Q8NHQ8 419 aa16.49■□□□□ 0.23
NEK4-206ENST00000496822 RSAD2Q8WXG1 361 aa16.49■□□□□ 0.23
NEK4-206ENST00000496822 SLC38A7Q9NVC3 462 aa16.49■□□□□ 0.23
NEK4-206ENST00000496822 TUBGCP4Q9UGJ1 667 aa16.49■□□□□ 0.23
NEK4-206ENST00000496822 FBXO2Q9UK22 296 aaPredicted RBP16.49■□□□□ 0.23
NEK4-206ENST00000496822 CDY1Q9Y6F8 540 aa16.49■□□□□ 0.23
NEK4-206ENST00000496822 CLDN3O15551 220 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 NARSO43776 548 aaKnown RBP16.48■□□□□ 0.23
NEK4-206ENST00000496822 FAM13AO94988 1023 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 AVPR2P30518 371 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 TNFSF9P41273 254 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 ZNF131P52739 623 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 SPAG1Q07617 926 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 TDGQ13569 410 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 RAB33AQ14088 237 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 ZBTB41Q5SVQ8 909 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 PDXDC1Q6P996 788 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 SLC7A14Q8TBB6 771 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 LARP4BQ92615 738 aaKnown RBP16.48■□□□□ 0.23
NEK4-206ENST00000496822 STAMQ92783 540 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 KCNN1Q92952 543 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 BICD1Q96G01 975 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 EPSTI1Q96J88 318 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 FIZ1Q96SL8 496 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 EPS15L1Q9UBC2 864 aa16.48■□□□□ 0.23
NEK4-206ENST00000496822 MYH11P35749 1972 aa16.47■□□□□ 0.23
NEK4-206ENST00000496822 MYO10Q9HD67 2058 aa16.47■□□□□ 0.23
NEK4-206ENST00000496822 MTCL1Q9Y4B5 1905 aaKnown RBP16.47■□□□□ 0.23
NEK4-206ENST00000496822 CCL16O15467 120 aa16.47■□□□□ 0.23
NEK4-206ENST00000496822 MATR3P43243 847 aaKnown RBP eCLIP16.47■□□□□ 0.23
NEK4-206ENST00000496822 CEBPZQ03701 1054 aaKnown RBP16.47■□□□□ 0.23
NEK4-206ENST00000496822 TCF15Q12870 199 aa16.47■□□□□ 0.23
NEK4-206ENST00000496822 PPM1LQ5SGD2 360 aa16.47■□□□□ 0.23
NEK4-206ENST00000496822 SLC39A4Q6P5W5 647 aa16.47■□□□□ 0.23
NEK4-206ENST00000496822 ANKS3Q6ZW76 656 aa16.47■□□□□ 0.23
NEK4-206ENST00000496822 GRASPQ7Z6J2 395 aaPredicted RBP16.47■□□□□ 0.23
NEK4-206ENST00000496822 MYCT1Q8N699 235 aa16.47■□□□□ 0.23
NEK4-206ENST00000496822 ST13P5Q8NFI4 369 aaPredicted RBP16.47■□□□□ 0.23
NEK4-206ENST00000496822 CLIC6Q96NY7 704 aa16.47■□□□□ 0.23
NEK4-206ENST00000496822 CCSER1Q9C0I3 900 aa16.47■□□□□ 0.23
NEK4-206ENST00000496822 ZHX3Q9H4I2 956 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms