RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 MYBP10242 640 aa13.55□□□□□ -0.24
CLDN12-213ENST00000496677 DDIT3P35638 169 aa13.55□□□□□ -0.24
CLDN12-213ENST00000496677 SMTNP53814 917 aa13.55□□□□□ -0.24
CLDN12-213ENST00000496677 OSTNP61366 133 aa13.55□□□□□ -0.24
CLDN12-213ENST00000496677 CREMQ03060 361 aa13.55□□□□□ -0.24
CLDN12-213ENST00000496677 ELAVL2Q12926 359 aaKnown RBP13.55□□□□□ -0.24
CLDN12-213ENST00000496677 STRN3Q13033 797 aa13.55□□□□□ -0.24
CLDN12-213ENST00000496677 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.55□□□□□ -0.24
CLDN12-213ENST00000496677 HAUS6Q7Z4H7 955 aa13.55□□□□□ -0.24
CLDN12-213ENST00000496677 PLCD3Q8N3E9 789 aa13.55□□□□□ -0.24
CLDN12-213ENST00000496677 KREMEN2Q8NCW0 462 aa13.55□□□□□ -0.24
CLDN12-213ENST00000496677 GOLGA2P5Q9HBQ8 144 aa13.55□□□□□ -0.24
CLDN12-213ENST00000496677 WDR6Q9NNW5 1121 aaKnown RBP13.55□□□□□ -0.24
CLDN12-213ENST00000496677 TOPORSQ9NS56 1045 aaPredicted RBP13.55□□□□□ -0.24
CLDN12-213ENST00000496677 LARSQ9P2J5 1176 aaKnown RBP13.55□□□□□ -0.24
CLDN12-213ENST00000496677 DPP7Q9UHL4 492 aa13.55□□□□□ -0.24
CLDN12-213ENST00000496677 SRPRBQ9Y5M8 271 aaKnown RBP13.55□□□□□ -0.24
CLDN12-213ENST00000496677 MUC6Q6W4X9 2439 aa13.55□□□□□ -0.24
CLDN12-213ENST00000496677 MYH11P35749 1972 aa13.54□□□□□ -0.24
CLDN12-213ENST00000496677 K7ELQ4 463 aaPredicted RBP13.54□□□□□ -0.24
CLDN12-213ENST00000496677 FAM189A1O60320 539 aa13.54□□□□□ -0.24
CLDN12-213ENST00000496677 ZMYND10O75800 440 aa13.54□□□□□ -0.24
CLDN12-213ENST00000496677 B3GAT3O94766 335 aa13.54□□□□□ -0.24
CLDN12-213ENST00000496677 PIGRP01833 764 aa13.54□□□□□ -0.24
CLDN12-213ENST00000496677 YARSP54577 528 aaKnown RBP13.54□□□□□ -0.24
CLDN12-213ENST00000496677 DHX8Q14562 1220 aaKnown RBP13.54□□□□□ -0.24
CLDN12-213ENST00000496677 PSMD5Q16401 504 aa13.54□□□□□ -0.24
CLDN12-213ENST00000496677 SEZ6Q53EL9 994 aa13.54□□□□□ -0.24
CLDN12-213ENST00000496677 RSPO2Q6UXX9 243 aaPredicted RBP13.54□□□□□ -0.24
CLDN12-213ENST00000496677 GLYCTKQ8IVS8 523 aa13.54□□□□□ -0.24
CLDN12-213ENST00000496677 TDRD5Q8NAT2 981 aaKnown RBP13.54□□□□□ -0.24
CLDN12-213ENST00000496677 SNX21Q969T3 373 aa13.54□□□□□ -0.24
CLDN12-213ENST00000496677 C18orf25Q96B23 403 aaPredicted RBP13.54□□□□□ -0.24
CLDN12-213ENST00000496677 DDX27Q96GQ7 796 aaKnown RBP13.54□□□□□ -0.24
CLDN12-213ENST00000496677 MFSD14AQ96MC6 490 aa13.54□□□□□ -0.24
CLDN12-213ENST00000496677 TCHPQ9BT92 498 aa13.54□□□□□ -0.24
CLDN12-213ENST00000496677 SMOC2Q9H3U7 446 aa13.54□□□□□ -0.24
CLDN12-213ENST00000496677 ZDHHC7Q9NXF8 308 aa13.54□□□□□ -0.24
CLDN12-213ENST00000496677 FBXW11Q9UKB1 542 aa13.54□□□□□ -0.24
CLDN12-213ENST00000496677 SORCS3Q9UPU3 1222 aa13.54□□□□□ -0.24
CLDN12-213ENST00000496677 TTC26A0AVF1 554 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 H0YCG3 227 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 TBC1D4O60343 1298 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 ASGR2P07307 311 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 ADRB2P07550 413 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 SCP2P22307 547 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 MARCKSP29966 332 aaPredicted RBP13.53□□□□□ -0.24
CLDN12-213ENST00000496677 RPL9P32969 192 aaKnown RBP13.53□□□□□ -0.24
CLDN12-213ENST00000496677 BRCC3P46736 316 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 RAB33AQ14088 237 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 NOLC1Q14978 699 aaKnown RBP eCLIP13.53□□□□□ -0.24
CLDN12-213ENST00000496677 SLC39A14Q15043 492 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 ZBTB6Q15916 424 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 SPECC1Q5M775 1068 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 PDXDC1Q6P996 788 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 ELMSAN1Q6PJG2 1045 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 CCDC149Q6ZUS6 474 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 OTOP3Q7RTS5 596 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 CEP57Q86XR8 500 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 UBALD2Q8IYN6 164 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 MYCT1Q8N699 235 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 PBXIP1Q96AQ6 731 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 CLIC6Q96NY7 704 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 PRKD2Q9BZL6 878 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 KCNH6Q9H252 994 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 PLEKHA5Q9HAU0 1116 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 PARVGQ9HBI0 331 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 SLC38A7Q9NVC3 462 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 MTRRQ9UBK8 725 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 TBX20Q9UMR3 447 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 BACE2Q9Y5Z0 518 aa13.53□□□□□ -0.24
CLDN12-213ENST00000496677 ZDBF2Q9HCK1 2354 aa13.52□□□□□ -0.24
CLDN12-213ENST00000496677 I3L4J1 428 aa13.52□□□□□ -0.25
CLDN12-213ENST00000496677 PODXLO00592 558 aa13.52□□□□□ -0.25
CLDN12-213ENST00000496677 CLDN3O15551 220 aa13.52□□□□□ -0.25
CLDN12-213ENST00000496677 CLTAP09496 248 aa13.52□□□□□ -0.25
CLDN12-213ENST00000496677 TKTP29401 623 aaKnown RBP13.52□□□□□ -0.25
CLDN12-213ENST00000496677 GTF2BQ00403 316 aa13.52□□□□□ -0.25
CLDN12-213ENST00000496677 MRPL58Q14197 206 aaKnown RBP13.52□□□□□ -0.25
CLDN12-213ENST00000496677 SLC39A4Q6P5W5 647 aa13.52□□□□□ -0.25
CLDN12-213ENST00000496677 FBXL6Q8N531 539 aa13.52□□□□□ -0.25
CLDN12-213ENST00000496677 SMG7Q92540 1137 aaKnown RBP13.52□□□□□ -0.25
CLDN12-213ENST00000496677 LARP4BQ92615 738 aaKnown RBP13.52□□□□□ -0.25
CLDN12-213ENST00000496677 FAM122AQ96E09 287 aa13.52□□□□□ -0.25
CLDN12-213ENST00000496677 USP28Q96RU2 1077 aa13.52□□□□□ -0.25
CLDN12-213ENST00000496677 MYADMQ96S97 322 aa13.52□□□□□ -0.25
CLDN12-213ENST00000496677 STRA6Q9BX79 667 aa13.52□□□□□ -0.25
CLDN12-213ENST00000496677 ST6GALNAC4Q9H4F1 302 aa13.52□□□□□ -0.25
CLDN12-213ENST00000496677 ANKFY1Q9P2R3 1169 aa13.52□□□□□ -0.25
CLDN12-213ENST00000496677 EPS15L1Q9UBC2 864 aa13.52□□□□□ -0.25
CLDN12-213ENST00000496677 CLUHO75153 1309 aa13.52□□□□□ -0.25
CLDN12-213ENST00000496677 CITO14578 2027 aa13.52□□□□□ -0.25
CLDN12-213ENST00000496677 DOCK6Q96HP0 2047 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 A0A0B4J269 797 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 TRAPPC3O43617 180 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 STX6O43752 255 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 TRAK2O60296 914 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 FAM13AO94988 1023 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 HARSP12081 509 aaKnown RBP13.51□□□□□ -0.25
CLDN12-213ENST00000496677 NMT1P30419 496 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms