RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 MBTPS2O43462 519 aa17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 CLTAP09496 248 aa17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 CNPP09543 421 aaKnown RBP17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 ENOX2Q16206 610 aaKnown RBP17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 LLGL2Q6P1M3 1020 aa17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 SYCE2Q6PIF2 218 aa17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 GRAMD1CQ8IYS0 662 aa17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 KLHL5Q96PQ7 755 aa17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 SCAND2PQ9GZW5 306 aaPredicted RBP17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 S1PR5Q9H228 398 aa17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 MAGEF1Q9HAY2 307 aa17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 RXFP1Q9HBX9 757 aa17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 GDPD2Q9HCC8 539 aa17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 SERTAD1Q9UHV2 236 aa17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 CD207Q9UJ71 328 aa17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 CPSF3Q9UKF6 684 aaKnown RBP17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 ATP6V1DQ9Y5K8 247 aa17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 VWA8A3KMH1 1905 aa17.6■□□□□ 0.41
DNMT3A-215ENST00000496570 FSD2A1L4K1 749 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 GCNT3O95395 438 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 SLFN14P0C7P3 912 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 HOXD13P35453 343 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 MATR3P43243 847 aaKnown RBP eCLIP17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 GLUD2P49448 558 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 CUL4BQ13620 913 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 ZBTB6Q15916 424 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 PUS10Q3MIT2 529 aaKnown RBP17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 RTP2Q5QGT7 225 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 ANKRD54Q6NXT1 300 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 CRELD2Q6UXH1 353 aaPredicted RBP17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 CCDC65Q8IXS2 484 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 ZSWIM2Q8NEG5 633 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 FEZF2Q8TBJ5 459 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 UHRF1Q96T88 793 aaPredicted RBP17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 MSTO1Q9BUK6 570 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 LRRC27Q9C0I9 530 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 BLZF1Q9H2G9 400 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 GOLPH3LQ9H4A5 285 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 PLEKHA5Q9HAU0 1116 aa17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 MRPL17Q9NRX2 175 aaKnown RBP17.59■□□□□ 0.41
DNMT3A-215ENST00000496570 ANK1P16157 1881 aa17.58■□□□□ 0.41
DNMT3A-215ENST00000496570 SF3B1O75533 1304 aaKnown RBP eCLIP17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 LACTBL1A8MY62 500 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 C2CD2LO14523 706 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 TADA2AO75478 443 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 PRPF6O94906 941 aaKnown RBP17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 URODP06132 367 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 EPCAMP16422 314 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 CA8P35219 290 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 CLCN4P51793 760 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 NDUFA8P51970 172 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 ASIC1P78348 528 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 NUCB2P80303 420 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 AMPD3Q01432 767 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 SPAG1Q07617 926 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 SMAD4Q13485 552 aaKnown RBP17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 SMAD2Q15796 467 aaKnown RBP17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 USP41Q3LFD5 358 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 EPM2AIP1Q7L775 607 aaPredicted RBP17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 GPR65Q8IYL9 337 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 PAGE5Q96GU1 130 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 UROC1Q96N76 676 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 ACCSQ96QU6 501 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 CD320Q9NPF0 282 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 TUBGCP4Q9UGJ1 667 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 PLXNA3P51805 1871 aa17.58■□□□□ 0.4
DNMT3A-215ENST00000496570 A0A1W2PQ27 194 aa17.57■□□□□ 0.4
DNMT3A-215ENST00000496570 A0A1W2PQ64 194 aa17.57■□□□□ 0.4
DNMT3A-215ENST00000496570 A0A1W2PQD8 194 aa17.57■□□□□ 0.4
DNMT3A-215ENST00000496570 TEX28O15482 410 aa17.57■□□□□ 0.4
DNMT3A-215ENST00000496570 KLRC4O43908 158 aa17.57■□□□□ 0.4
DNMT3A-215ENST00000496570 AFMP43652 599 aa17.57■□□□□ 0.4
DNMT3A-215ENST00000496570 ALCAMQ13740 583 aa17.57■□□□□ 0.4
DNMT3A-215ENST00000496570 BMS1Q14692 1282 aaKnown RBP17.57■□□□□ 0.4
DNMT3A-215ENST00000496570 SLFN12LQ6IEE8 588 aa17.57■□□□□ 0.4
DNMT3A-215ENST00000496570 DCLRE1AQ6PJP8 1040 aa17.57■□□□□ 0.4
DNMT3A-215ENST00000496570 UNC13DQ70J99 1090 aa17.57■□□□□ 0.4
DNMT3A-215ENST00000496570 SUSD6Q92537 303 aa17.57■□□□□ 0.4
DNMT3A-215ENST00000496570 SLC38A7Q9NVC3 462 aa17.57■□□□□ 0.4
DNMT3A-215ENST00000496570 PCDHB13Q9Y5F0 798 aa17.57■□□□□ 0.4
DNMT3A-215ENST00000496570 NCOR1O75376 2440 aa17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 PODXLO00592 558 aa17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 B3GAT3O94766 335 aa17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 FGFR3P22607 806 aa17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 BRCC3P46736 316 aa17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 ACOT2P49753 483 aa17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 WNT7BP56706 349 aa17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 KYAT1Q16773 422 aa17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 FAM171A1Q5VUB5 890 aa17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 PRSS55Q6UWB4 352 aaPredicted RBP17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 LNX1Q8TBB1 728 aaPredicted RBP17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 RIN2Q8WYP3 895 aaPredicted RBP17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 CASP10Q92851 521 aa17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 PYM1Q9BRP8 204 aaKnown RBP17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 CDH22Q9UJ99 828 aa17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 AGO2Q9UKV8 859 aaKnown RBP17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 USP15Q9Y4E8 981 aaPredicted RBP17.56■□□□□ 0.4
DNMT3A-215ENST00000496570 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.55■□□□□ 0.4
DNMT3A-215ENST00000496570 PVALEFA0A1B0GWK0 134 aa17.55■□□□□ 0.4
DNMT3A-215ENST00000496570 I3L4J1 428 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms