RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 SPG21Q9NZD8 308 aa10.5□□□□□ -0.73
PRPF3-207ENST00000496202 DNAJB4Q9UDY4 337 aa10.5□□□□□ -0.73
PRPF3-207ENST00000496202 PLAGL2Q9UPG8 496 aa10.5□□□□□ -0.73
PRPF3-207ENST00000496202 TRAF3IP3Q9Y228 551 aa10.5□□□□□ -0.73
PRPF3-207ENST00000496202 FAN1Q9Y2M0 1017 aa10.5□□□□□ -0.73
PRPF3-207ENST00000496202 PRG3Q9Y2Y8 225 aaPredicted RBP10.5□□□□□ -0.73
PRPF3-207ENST00000496202 CASTOR2A6NHX0 329 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 CETN3O15182 167 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 ALDH2P05091 517 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 NR2F2P24468 414 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 CCNE1P24864 410 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 PBX3P40426 434 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 SLC11A1P49279 550 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 KRT17Q04695 432 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 DSC1Q08554 894 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 MYBPC2Q14324 1141 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 XKR4Q5GH76 650 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 JADE1Q6IE81 842 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 CENPPQ6IPU0 288 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 CRELD2Q6UXH1 353 aaPredicted RBP10.49□□□□□ -0.73
PRPF3-207ENST00000496202 ALKAL1Q6UXT8 129 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 SPRED2Q7Z698 418 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 ZNF280BQ86YH2 543 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 CBWD2Q8IUF1 395 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 SLC9A9Q8IVB4 645 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 COLGALT2Q8IYK4 626 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 DEFB123Q8N688 67 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 MLKLQ8NB16 471 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 RDH13Q8NBN7 331 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 ZSWIM2Q8NEG5 633 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 BEST2Q8NFU1 509 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 GDPD5Q8WTR4 605 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 CACTINQ8WUQ7 758 aaKnown RBP10.49□□□□□ -0.73
PRPF3-207ENST00000496202 TMEM169Q96HH4 297 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 UROC1Q96N76 676 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 PPP1R10Q96QC0 940 aaKnown RBP10.49□□□□□ -0.73
PRPF3-207ENST00000496202 FNBP1Q96RU3 617 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 COLEC11Q9BWP8 271 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 TTYH1Q9H313 450 aaPredicted RBP10.49□□□□□ -0.73
PRPF3-207ENST00000496202 SEMA6BQ9H3T3 888 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 PRDM12Q9H4Q4 367 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 ASB7Q9H672 318 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 MIOSQ9NXC5 875 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 PUF60Q9UHX1 559 aaKnown RBP10.49□□□□□ -0.73
PRPF3-207ENST00000496202 UBQLN1Q9UMX0 589 aaKnown RBP10.49□□□□□ -0.73
PRPF3-207ENST00000496202 DERAQ9Y315 318 aa10.49□□□□□ -0.73
PRPF3-207ENST00000496202 R3HCC1Q9Y3T6 440 aaKnown RBP10.49□□□□□ -0.73
PRPF3-207ENST00000496202 COL4A4P53420 1690 aaPredicted RBP10.49□□□□□ -0.73
PRPF3-207ENST00000496202 PRRC2BQ5JSZ5 2229 aaKnown RBP10.49□□□□□ -0.73
PRPF3-207ENST00000496202 PPP1R3GB7ZBB8 358 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 NT5C1B-RDH14C9J2C7 533 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 FGF18O76093 207 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 DDHD2O94830 711 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 ADRB2P07550 413 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 GALTP07902 379 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 NFICP08651 508 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 TMEM191BP0C7N4 346 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 DLATP10515 647 aaKnown RBP10.48□□□□□ -0.73
PRPF3-207ENST00000496202 EPB41P11171 864 aaKnown RBP10.48□□□□□ -0.73
PRPF3-207ENST00000496202 KRT13P13646 458 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 CD44P16070 742 aaKnown RBP10.48□□□□□ -0.73
PRPF3-207ENST00000496202 BMP6P22004 513 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 NLRP12P59046 1061 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 TFAMQ00059 246 aaKnown RBP10.48□□□□□ -0.73
PRPF3-207ENST00000496202 SPAG1Q07617 926 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 CYP24A1Q07973 514 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 ADAM9Q13443 819 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 GPM6BQ13491 265 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 STX1AQ16623 288 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 NFIL3Q16649 462 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 PTPROQ16827 1216 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 TPD52L1Q16890 204 aaPredicted RBP10.48□□□□□ -0.73
PRPF3-207ENST00000496202 ZCWPW2Q504Y3 356 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 RBM43Q6ZSC3 357 aaKnown RBP10.48□□□□□ -0.73
PRPF3-207ENST00000496202 USP37Q86T82 979 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 NT5DC4Q86YG4 428 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 FAM186BQ8IYM0 893 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 SLC39A11Q8N1S5 342 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 KLHL23Q8NBE8 558 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 GSTCDQ8NEC7 633 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 DDX27Q96GQ7 796 aaKnown RBP10.48□□□□□ -0.73
PRPF3-207ENST00000496202 FBXL18Q96ME1 805 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 ZMAT2Q96NC0 199 aaKnown RBP10.48□□□□□ -0.73
PRPF3-207ENST00000496202 GAS2L1Q99501 681 aaPredicted RBP10.48□□□□□ -0.73
PRPF3-207ENST00000496202 CXCL16Q9H2A7 254 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 PDE11AQ9HCR9 933 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 ANO10Q9NW15 660 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 DMAC2Q9NW81 257 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 TMEM63CQ9P1W3 806 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 C2CD2Q9Y426 696 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 CHD9Q3L8U1 2897 aa10.48□□□□□ -0.73
PRPF3-207ENST00000496202 PLXNA4Q9HCM2 1894 aa10.47□□□□□ -0.73
PRPF3-207ENST00000496202 TRIM49BA6NDI0 452 aa10.47□□□□□ -0.73
PRPF3-207ENST00000496202 C5orf67F2Z3F1 127 aa10.47□□□□□ -0.73
PRPF3-207ENST00000496202 H3BNC9 293 aa10.47□□□□□ -0.73
PRPF3-207ENST00000496202 PODXLO00592 558 aa10.47□□□□□ -0.73
PRPF3-207ENST00000496202 NRP1O14786 923 aa10.47□□□□□ -0.73
PRPF3-207ENST00000496202 MEFVO15553 781 aaPredicted RBP10.47□□□□□ -0.73
PRPF3-207ENST00000496202 B4GALT3O60512 393 aa10.47□□□□□ -0.73
PRPF3-207ENST00000496202 LETM1O95202 739 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms