RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 RTN4Q9NQC3 1192 aaKnown RBP23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 INTS13Q9NVM9 706 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 MIOSQ9NXC5 875 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 IFNKQ9P0W0 207 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 A0A1B0GTH6 734 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 PES1O00541 588 aaKnown RBP23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 PTGESO14684 152 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 AFPP02771 609 aaKnown RBP23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 TPM2P07951 284 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 FGFR1P11362 822 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 KCNE1P15382 129 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 WDR5P61964 334 aaKnown RBP23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 NR1I3Q14994 352 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 ZBTB6Q15916 424 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 GLRA4Q5JXX5 417 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 LRFN2Q9ULH4 789 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 C2CD2Q9Y426 696 aa23.6■■□□□ 1.37
ECHDC3-205ENST00000496136 RALGAPA2Q2PPJ7 1873 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 STX10O60499 249 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 GTF2H1P32780 548 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 FMO5P49326 533 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 TFAMQ00059 246 aaKnown RBP23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 DUOXA2Q1HG44 320 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 FILIP1LQ4L180 1135 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 CBWD6Q4V339 395 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 CBWD3Q5JTY5 395 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 CLLU1OSQ5K130 101 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 CBWD5Q5RIA9 395 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 PSRC1Q6PGN9 363 aaPredicted RBP23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 SV2AQ7L0J3 742 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 NT5DC4Q86YG4 428 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 NPAS4Q8IUM7 802 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 TOP1MTQ969P6 601 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 KIF12Q96FN5 646 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 TSPAN18Q96SJ8 248 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 TMEM117Q9H0C3 514 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 RNF216Q9NWF9 866 aaPredicted RBP23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 DERAQ9Y315 318 aa23.59■■□□□ 1.37
ECHDC3-205ENST00000496136 LGALS16A8MUM7 142 aa23.58■■□□□ 1.37
ECHDC3-205ENST00000496136 C4BPAP04003 597 aaKnown RBP23.58■■□□□ 1.37
ECHDC3-205ENST00000496136 TMEM132DQ14C87 1099 aa23.58■■□□□ 1.37
ECHDC3-205ENST00000496136 C15orf39Q6ZRI6 1047 aa23.58■■□□□ 1.37
ECHDC3-205ENST00000496136 TRIM5Q9C035 493 aa23.58■■□□□ 1.37
ECHDC3-205ENST00000496136 XPO4Q9C0E2 1151 aaKnown RBP23.58■■□□□ 1.37
ECHDC3-205ENST00000496136 PLAGL2Q9UPG8 496 aa23.58■■□□□ 1.37
ECHDC3-205ENST00000496136 PDCD11Q14690 1871 aaKnown RBP23.58■■□□□ 1.36
ECHDC3-205ENST00000496136 INPPL1O15357 1258 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 TEX33O43247 280 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 UPP2O95045 317 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 AMHP03971 560 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 MRE11P49959 708 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 AP3M2P53677 418 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 DEFB103AP81534 67 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 GLB1LQ6UWU2 654 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 HELQQ8TDG4 1101 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 CACTINQ8WUQ7 758 aaKnown RBP23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 RPS6KC1Q96S38 1066 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 MTMR12Q9C0I1 747 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 TMEM8AQ9HCN3 771 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 SCNN1GP51170 649 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 UBXN1Q04323 297 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 ZACNQ401N2 412 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 KRT39Q6A163 491 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 PPP1R10Q96QC0 940 aaKnown RBP23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 INPP5FQ9Y2H2 1132 aa23.57■■□□□ 1.36
ECHDC3-205ENST00000496136 PMM2O15305 246 aa23.56■■□□□ 1.36
ECHDC3-205ENST00000496136 THP07101 528 aa23.56■■□□□ 1.36
ECHDC3-205ENST00000496136 TMEM191BP0C7N4 346 aa23.56■■□□□ 1.36
ECHDC3-205ENST00000496136 MAGEA10P43363 369 aaPredicted RBP23.56■■□□□ 1.36
ECHDC3-205ENST00000496136 TDRD10Q5VZ19 366 aaKnown RBP23.56■■□□□ 1.36
ECHDC3-205ENST00000496136 TRAPPC11Q7Z392 1133 aa23.56■■□□□ 1.36
ECHDC3-205ENST00000496136 HERVK_113Q902F9 699 aa23.56■■□□□ 1.36
ECHDC3-205ENST00000496136 C18orf25Q96B23 403 aaPredicted RBP23.56■■□□□ 1.36
ECHDC3-205ENST00000496136 ANKRD36BP1Q96IX9 119 aa23.56■■□□□ 1.36
ECHDC3-205ENST00000496136 CXXC1Q9P0U4 656 aaPredicted RBP23.56■■□□□ 1.36
ECHDC3-205ENST00000496136 ZBBXA8MT70 800 aa23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 POMCP01189 267 aa23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 KCNJ6P48051 423 aa23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 MXI1P50539 228 aa23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 SCARA3Q6AZY7 606 aa23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 TMCO2Q7Z6W1 182 aaPredicted RBP23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 TMEM130Q8N3G9 435 aa23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 UBQLN1Q9UMX0 589 aaKnown RBP23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 TDRD15B5MCY1 1934 aaKnown RBP23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 P4HA2O15460 535 aa23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 HOXA2O43364 376 aa23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 TNNC2P02585 160 aa23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 GATMP50440 423 aa23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 NAB2Q15742 525 aa23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 NOMO2Q5JPE7 1267 aa23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 FKBP15Q5T1M5 1219 aa23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 CASD1Q96PB1 797 aa23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 DPP3Q9NY33 737 aa23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 COQ4Q9Y3A0 265 aa23.55■■□□□ 1.36
ECHDC3-205ENST00000496136 CBFA2T2O43439 604 aa23.54■■□□□ 1.36
ECHDC3-205ENST00000496136 N4BP1O75113 896 aaKnown RBP23.54■■□□□ 1.36
ECHDC3-205ENST00000496136 DGKIO75912 1065 aa23.54■■□□□ 1.36
ECHDC3-205ENST00000496136 CST3P01034 146 aaPredicted RBP23.54■■□□□ 1.36
ECHDC3-205ENST00000496136 GUCY2FP51841 1108 aa23.54■■□□□ 1.36
ECHDC3-205ENST00000496136 SOX4Q06945 474 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms