RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 PRPF4BQ13523 1007 aaKnown RBP19.93■□□□□ 0.78
TSPAN4-212ENST00000494815 FAM187BQ17R55 369 aa19.93■□□□□ 0.78
TSPAN4-212ENST00000494815 ZBTB41Q5SVQ8 909 aa19.93■□□□□ 0.78
TSPAN4-212ENST00000494815 MPZL3Q6UWV2 235 aa19.93■□□□□ 0.78
TSPAN4-212ENST00000494815 FAM71AQ8IYT1 594 aa19.93■□□□□ 0.78
TSPAN4-212ENST00000494815 OLIG1Q8TAK6 271 aa19.93■□□□□ 0.78
TSPAN4-212ENST00000494815 ZBTB10Q96DT7 871 aa19.93■□□□□ 0.78
TSPAN4-212ENST00000494815 KREMEN1Q96MU8 473 aa19.93■□□□□ 0.78
TSPAN4-212ENST00000494815 IFT122Q9HBG6 1241 aa19.93■□□□□ 0.78
TSPAN4-212ENST00000494815 PTPRHQ9HD43 1115 aa19.93■□□□□ 0.78
TSPAN4-212ENST00000494815 PRMT7Q9NVM4 692 aaPredicted RBP19.93■□□□□ 0.78
TSPAN4-212ENST00000494815 SALL4Q9UJQ4 1053 aa19.93■□□□□ 0.78
TSPAN4-212ENST00000494815 GJD2Q9UKL4 321 aa19.93■□□□□ 0.78
TSPAN4-212ENST00000494815 CNTNAP2Q9UHC6 1331 aa19.92■□□□□ 0.78
TSPAN4-212ENST00000494815 TNPO2O14787 897 aaKnown RBP19.92■□□□□ 0.78
TSPAN4-212ENST00000494815 AP3M2P53677 418 aa19.92■□□□□ 0.78
TSPAN4-212ENST00000494815 GRIK4Q16099 956 aa19.92■□□□□ 0.78
TSPAN4-212ENST00000494815 CAPZA3Q96KX2 299 aa19.92■□□□□ 0.78
TSPAN4-212ENST00000494815 ABT1Q9ULW3 272 aaKnown RBP19.92■□□□□ 0.78
TSPAN4-212ENST00000494815 DYNC1LI2O43237 492 aaPredicted RBP19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 IGHA2P01877 340 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 WNT7BP56706 349 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 PRAMEF19Q5SWL8 479 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 ATF7IP2Q5U623 682 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 LNX1Q8TBB1 728 aaPredicted RBP19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 PACSIN1Q9BY11 444 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 EVPLQ92817 2033 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 RRN3P2A6NIE6 340 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 CA12O43570 354 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 ECM2O94769 699 aaPredicted RBP19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 HARSP12081 509 aaKnown RBP19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 CYP2B6P20813 491 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 SURF1Q15526 300 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 TTC31Q49AM3 519 aaPredicted RBP19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 TDRD10Q5VZ19 366 aaKnown RBP19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 TLK2Q86UE8 772 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 GLYCTKQ8IVS8 523 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 SMC1BQ8NDV3 1235 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 KAT5Q92993 513 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 C1orf112Q9NSG2 853 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 AKT3Q9Y243 479 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 TNFSF13BQ9Y275 285 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 Q9Y3F1 56 aa19.91■□□□□ 0.78
TSPAN4-212ENST00000494815 F2P00734 622 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 H2AFZP0C0S5 128 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 CCL14Q16627 93 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 MARCH8Q5T0T0 291 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 H2AFVQ71UI9 128 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 ZBTB33Q86T24 672 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 U2AF1L4Q8WU68 220 aaKnown RBP19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 PPM1EQ8WY54 764 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 AGPAT1Q99943 283 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 SELENOOQ9BVL4 669 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 MINDY3Q9H8M7 445 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 CPSF3Q9UKF6 684 aaKnown RBP19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 PTPRJQ12913 1337 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 ZSWIM8A7E2V4 1837 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 SHOX2O60902 331 aaPredicted RBP19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 HLA-DRAP01903 254 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 TNFAIP3P21580 790 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 GGCXP38435 758 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 BIRC3Q13489 604 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 ZNF568Q3ZCX4 644 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 WDR44Q5JSH3 913 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 LMBRD2Q68DH5 695 aaPredicted RBP19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 CCNI2Q6ZMN8 369 aaPredicted RBP19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 WDR49Q8IV35 697 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 CAGE1Q8TC20 777 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 GPBP1L1Q9HC44 474 aaPredicted RBP19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 PCDHGC5Q9Y5F6 944 aa19.9■□□□□ 0.78
TSPAN4-212ENST00000494815 A0A0A6YYK5 440 aaPredicted RBP19.89■□□□□ 0.77
TSPAN4-212ENST00000494815 ZEB2O60315 1214 aa19.89■□□□□ 0.77
TSPAN4-212ENST00000494815 PIK3CAP42336 1068 aa19.89■□□□□ 0.77
TSPAN4-212ENST00000494815 NAP1L1P55209 391 aaKnown RBP19.89■□□□□ 0.77
TSPAN4-212ENST00000494815 IFI16Q16666 785 aaKnown RBP19.89■□□□□ 0.77
TSPAN4-212ENST00000494815 ZNF668Q96K58 619 aaPredicted RBP19.89■□□□□ 0.77
TSPAN4-212ENST00000494815 A0A087WZ62 844 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 TMEM88BA6NKF7 163 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 B4GALT5O43286 388 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 BUB1O43683 1085 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 PRLRP16471 622 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 TNFSF9P41273 254 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 CPT1AP50416 773 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 TMEM132AQ24JP5 1023 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 DNAJC21Q5F1R6 531 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 RIN2Q8WYP3 895 aaPredicted RBP19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 FDXACB1Q9BRP7 624 aaPredicted RBP19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 NRCAMQ92823 1304 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 AGPSO00116 658 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 IQCF3P0C7M6 154 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 MYBL2P10244 700 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 USP8P40818 1118 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 SEZ6Q53EL9 994 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 ZNF410Q86VK4 478 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 PACS2Q86VP3 889 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 EFCAB13Q8IY85 973 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 EPS8L1Q8TE68 723 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 TATDN2Q93075 761 aa19.88■□□□□ 0.77
TSPAN4-212ENST00000494815 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.88■□□□□ 0.775e-8■■■■■ 188.1
TSPAN4-212ENST00000494815 TSKSQ9UJT2 592 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms