RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 MRPL4Q9BYD3 311 aaKnown RBP25.51■■□□□ 1.67
COL27A1-208ENST00000494780 CDT1Q9H211 546 aa25.51■■□□□ 1.67
COL27A1-208ENST00000494780 PTPRHQ9HD43 1115 aa25.51■■□□□ 1.67
COL27A1-208ENST00000494780 ARHGEF3Q9NR81 526 aa25.51■■□□□ 1.67
COL27A1-208ENST00000494780 RBM19Q9Y4C8 960 aaKnown RBP25.51■■□□□ 1.67
COL27A1-208ENST00000494780 BACE2Q9Y5Z0 518 aa25.51■■□□□ 1.67
COL27A1-208ENST00000494780 HIP1RO75146 1068 aa25.5■■□□□ 1.67
COL27A1-208ENST00000494780 IGFBP6P24592 240 aaPredicted RBP25.5■■□□□ 1.67
COL27A1-208ENST00000494780 ZNF568Q3ZCX4 644 aa25.5■■□□□ 1.67
COL27A1-208ENST00000494780 ALKAL1Q6UXT8 129 aa25.5■■□□□ 1.67
COL27A1-208ENST00000494780 ANKS3Q6ZW76 656 aa25.5■■□□□ 1.67
COL27A1-208ENST00000494780 DDX27Q96GQ7 796 aaKnown RBP25.5■■□□□ 1.67
COL27A1-208ENST00000494780 DRC1Q96MC2 740 aa25.5■■□□□ 1.67
COL27A1-208ENST00000494780 GOLGA2P5Q9HBQ8 144 aa25.5■■□□□ 1.67
COL27A1-208ENST00000494780 ARHGAP28Q9P2N2 729 aa25.5■■□□□ 1.67
COL27A1-208ENST00000494780 POLIQ9UNA4 740 aa25.5■■□□□ 1.67
COL27A1-208ENST00000494780 TKTP29401 623 aaKnown RBP25.49■■□□□ 1.67
COL27A1-208ENST00000494780 RINT1Q6NUQ1 792 aa25.49■■□□□ 1.67
COL27A1-208ENST00000494780 PARM1Q6UWI2 310 aa25.49■■□□□ 1.67
COL27A1-208ENST00000494780 DTHD1Q6ZMT9 781 aa25.49■■□□□ 1.67
COL27A1-208ENST00000494780 MTSS1LQ765P7 747 aa25.49■■□□□ 1.67
COL27A1-208ENST00000494780 CEP120Q8N960 986 aa25.49■■□□□ 1.67
COL27A1-208ENST00000494780 FGF13Q92913 245 aa25.49■■□□□ 1.67
COL27A1-208ENST00000494780 FGF14Q92915 247 aa25.49■■□□□ 1.67
COL27A1-208ENST00000494780 C17orf75Q9HAS0 396 aa25.49■■□□□ 1.67
COL27A1-208ENST00000494780 KMT5AQ9NQR1 393 aa25.49■■□□□ 1.67
COL27A1-208ENST00000494780 SLC38A7Q9NVC3 462 aa25.49■■□□□ 1.67
COL27A1-208ENST00000494780 CDY1Q9Y6F8 540 aa25.49■■□□□ 1.67
COL27A1-208ENST00000494780 PTPRZ1P23471 2315 aaPredicted RBP25.48■■□□□ 1.67
COL27A1-208ENST00000494780 PP2D1A8MPX8 630 aa25.48■■□□□ 1.67
COL27A1-208ENST00000494780 MCF2P10911 925 aa25.48■■□□□ 1.67
COL27A1-208ENST00000494780 IL17AQ16552 155 aa25.48■■□□□ 1.67
COL27A1-208ENST00000494780 RSPO2Q6UXX9 243 aaPredicted RBP25.48■■□□□ 1.67
COL27A1-208ENST00000494780 C1orf186Q6ZWK4 172 aa25.48■■□□□ 1.67
COL27A1-208ENST00000494780 TAS1R3Q7RTX0 852 aa25.48■■□□□ 1.67
COL27A1-208ENST00000494780 C3orf58Q8NDZ4 430 aa25.48■■□□□ 1.67
COL27A1-208ENST00000494780 RPP25Q9BUL9 199 aaKnown RBP25.48■■□□□ 1.67
COL27A1-208ENST00000494780 RUSC1Q9BVN2 902 aa25.48■■□□□ 1.67
COL27A1-208ENST00000494780 TIPINQ9BVW5 301 aa25.48■■□□□ 1.67
COL27A1-208ENST00000494780 TARS2Q9BW92 718 aaKnown RBP25.48■■□□□ 1.67
COL27A1-208ENST00000494780 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.48■■□□□ 1.67
COL27A1-208ENST00000494780 DOCK6Q96HP0 2047 aa25.47■■□□□ 1.67
COL27A1-208ENST00000494780 RIF1Q5UIP0 2472 aaKnown RBP25.47■■□□□ 1.67
COL27A1-208ENST00000494780 BRCC3P46736 316 aa25.47■■□□□ 1.67
COL27A1-208ENST00000494780 OSTNP61366 133 aa25.47■■□□□ 1.67
COL27A1-208ENST00000494780 SOX4Q06945 474 aaPredicted RBP25.47■■□□□ 1.67
COL27A1-208ENST00000494780 MAPK7Q13164 816 aa25.47■■□□□ 1.67
COL27A1-208ENST00000494780 ST13P5Q8NFI4 369 aaPredicted RBP25.47■■□□□ 1.67
COL27A1-208ENST00000494780 ITFG1Q8TB96 612 aa25.47■■□□□ 1.67
COL27A1-208ENST00000494780 SNX27Q96L92 541 aa25.47■■□□□ 1.67
COL27A1-208ENST00000494780 MMTAG2Q9BU76 263 aaKnown RBP25.47■■□□□ 1.67
COL27A1-208ENST00000494780 KCNH3Q9ULD8 1083 aa25.47■■□□□ 1.67
COL27A1-208ENST00000494780 SIT1Q9Y3P8 196 aa25.47■■□□□ 1.67
COL27A1-208ENST00000494780 KIF3AQ9Y496 699 aa25.47■■□□□ 1.67
COL27A1-208ENST00000494780 TRIP11Q15643 1979 aa25.47■■□□□ 1.67
COL27A1-208ENST00000494780 I3L4J1 428 aa25.46■■□□□ 1.67
COL27A1-208ENST00000494780 KCNE1P15382 129 aa25.46■■□□□ 1.67
COL27A1-208ENST00000494780 PROZP22891 400 aa25.46■■□□□ 1.67
COL27A1-208ENST00000494780 CDC25AP30304 524 aa25.46■■□□□ 1.67
COL27A1-208ENST00000494780 GPC5P78333 572 aa25.46■■□□□ 1.67
COL27A1-208ENST00000494780 PABPC1LQ4VXU2 614 aaKnown RBP25.46■■□□□ 1.67
COL27A1-208ENST00000494780 KCNK18Q7Z418 384 aa25.46■■□□□ 1.67
COL27A1-208ENST00000494780 SHDQ96IW2 340 aa25.46■■□□□ 1.67
COL27A1-208ENST00000494780 ACAP3Q96P50 834 aa25.46■■□□□ 1.67
COL27A1-208ENST00000494780 NTPCRQ9BSD7 190 aaKnown RBP25.46■■□□□ 1.67
COL27A1-208ENST00000494780 TCHPQ9BT92 498 aa25.46■■□□□ 1.67
COL27A1-208ENST00000494780 DNMT3BQ9UBC3 853 aaKnown RBP25.46■■□□□ 1.67
COL27A1-208ENST00000494780 KCNG1Q9UIX4 513 aa25.46■■□□□ 1.67
COL27A1-208ENST00000494780 MYO15AQ9UKN7 3530 aa25.46■■□□□ 1.67
COL27A1-208ENST00000494780 FAM186AA6NE01 2351 aa25.45■■□□□ 1.66
COL27A1-208ENST00000494780 PODXLO00592 558 aa25.45■■□□□ 1.66
COL27A1-208ENST00000494780 ABLIM1O14639 778 aa25.45■■□□□ 1.66
COL27A1-208ENST00000494780 GUCY2CP25092 1073 aa25.45■■□□□ 1.66
COL27A1-208ENST00000494780 STARD6P59095 220 aa25.45■■□□□ 1.66
COL27A1-208ENST00000494780 SLC8B1Q6J4K2 584 aa25.45■■□□□ 1.66
COL27A1-208ENST00000494780 MPZL3Q6UWV2 235 aa25.45■■□□□ 1.66
COL27A1-208ENST00000494780 KCTD17Q8N5Z5 321 aa25.45■■□□□ 1.66
COL27A1-208ENST00000494780 ZMAT2Q96NC0 199 aaKnown RBP25.45■■□□□ 1.66
COL27A1-208ENST00000494780 HCFC1R1Q9NWW0 138 aa25.45■■□□□ 1.66
COL27A1-208ENST00000494780 DLGAP2Q9P1A6 1054 aa25.45■■□□□ 1.66
COL27A1-208ENST00000494780 CNTN3Q9P232 1028 aa25.45■■□□□ 1.66
COL27A1-208ENST00000494780 RILPL1Q5EBL4 403 aa25.44■■□□□ 1.66
COL27A1-208ENST00000494780 ZNF461Q8TAF7 563 aa25.44■■□□□ 1.66
COL27A1-208ENST00000494780 SPIRE2Q8WWL2 714 aa25.44■■□□□ 1.66
COL27A1-208ENST00000494780 SYN3O14994 580 aa25.43■■□□□ 1.66
COL27A1-208ENST00000494780 SLC16A4O15374 487 aa25.43■■□□□ 1.66
COL27A1-208ENST00000494780 DCNP07585 359 aaKnown RBP25.43■■□□□ 1.66
COL27A1-208ENST00000494780 RPL9P32969 192 aaKnown RBP25.43■■□□□ 1.66
COL27A1-208ENST00000494780 ATP2C1P98194 919 aaPredicted RBP25.43■■□□□ 1.66
COL27A1-208ENST00000494780 ROR1Q01973 937 aa25.43■■□□□ 1.66
COL27A1-208ENST00000494780 SPECC1Q5M775 1068 aa25.43■■□□□ 1.66
COL27A1-208ENST00000494780 VARS2Q5ST30 1063 aaKnown RBP25.43■■□□□ 1.66
COL27A1-208ENST00000494780 HYIQ5T013 277 aa25.43■■□□□ 1.66
COL27A1-208ENST00000494780 NPAS3Q8IXF0 933 aa25.43■■□□□ 1.66
COL27A1-208ENST00000494780 SEMA4AQ9H3S1 761 aa25.43■■□□□ 1.66
COL27A1-208ENST00000494780 MYH15Q9Y2K3 1946 aa25.43■■□□□ 1.66
COL27A1-208ENST00000494780 ARHGEF37A1IGU5 675 aa25.42■■□□□ 1.66
COL27A1-208ENST00000494780 SFI1A8K8P3 1242 aa25.42■■□□□ 1.66
COL27A1-208ENST00000494780 H7C4K7 107 aa25.42■■□□□ 1.66
COL27A1-208ENST00000494780 ABLIM3O94929 683 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms