RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 ALKAL1Q6UXT8 129 aa12.78□□□□□ -0.36
VTI1A-208ENST00000494728 GET4Q7L5D6 327 aaPredicted RBP12.78□□□□□ -0.36
VTI1A-208ENST00000494728 PLCD3Q8N3E9 789 aa12.78□□□□□ -0.36
VTI1A-208ENST00000494728 SYT2Q8N9I0 419 aaPredicted RBP12.78□□□□□ -0.36
VTI1A-208ENST00000494728 TMEM161BQ8NDZ6 487 aa12.78□□□□□ -0.36
VTI1A-208ENST00000494728 HDAC7Q8WUI4 952 aa12.78□□□□□ -0.36
VTI1A-208ENST00000494728 C18orf25Q96B23 403 aaPredicted RBP12.78□□□□□ -0.36
VTI1A-208ENST00000494728 ACSF2Q96CM8 615 aaPredicted RBP12.78□□□□□ -0.36
VTI1A-208ENST00000494728 DDX27Q96GQ7 796 aaKnown RBP12.78□□□□□ -0.36
VTI1A-208ENST00000494728 DRC1Q96MC2 740 aa12.78□□□□□ -0.36
VTI1A-208ENST00000494728 MRPL4Q9BYD3 311 aaKnown RBP12.78□□□□□ -0.36
VTI1A-208ENST00000494728 PLEKHA4Q9H4M7 779 aa12.78□□□□□ -0.36
VTI1A-208ENST00000494728 TMEM134Q9H6X4 195 aa12.78□□□□□ -0.36
VTI1A-208ENST00000494728 ZDHHC7Q9NXF8 308 aa12.78□□□□□ -0.36
VTI1A-208ENST00000494728 DUSP12Q9UNI6 340 aa12.78□□□□□ -0.36
VTI1A-208ENST00000494728 COL4A2P08572 1712 aa12.78□□□□□ -0.36
VTI1A-208ENST00000494728 PATJQ8NI35 1801 aa12.78□□□□□ -0.36
VTI1A-208ENST00000494728 TCHHQ07283 1943 aa12.78□□□□□ -0.36
VTI1A-208ENST00000494728 EP300Q09472 2414 aaPredicted RBP12.77□□□□□ -0.37
VTI1A-208ENST00000494728 H3BQV1 296 aa12.77□□□□□ -0.37
VTI1A-208ENST00000494728 TMEM189-UBE2V1I3L0A0 370 aa12.77□□□□□ -0.37
VTI1A-208ENST00000494728 MAPTP10636 758 aaKnown RBP12.77□□□□□ -0.37
VTI1A-208ENST00000494728 NPR3P17342 541 aa12.77□□□□□ -0.37
VTI1A-208ENST00000494728 GBP2P32456 591 aaPredicted RBP12.77□□□□□ -0.37
VTI1A-208ENST00000494728 PTPN5P54829 565 aa12.77□□□□□ -0.37
VTI1A-208ENST00000494728 MPZL3Q6UWV2 235 aa12.77□□□□□ -0.37
VTI1A-208ENST00000494728 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.77□□□□□ -0.37
VTI1A-208ENST00000494728 PRKD2Q9BZL6 878 aa12.77□□□□□ -0.37
VTI1A-208ENST00000494728 ANKFY1Q9P2R3 1169 aa12.77□□□□□ -0.37
VTI1A-208ENST00000494728 EPS15L1Q9UBC2 864 aa12.77□□□□□ -0.37
VTI1A-208ENST00000494728 MTRRQ9UBK8 725 aa12.77□□□□□ -0.37
VTI1A-208ENST00000494728 KIF3AQ9Y496 699 aa12.77□□□□□ -0.37
VTI1A-208ENST00000494728 STK24Q9Y6E0 443 aa12.77□□□□□ -0.37
VTI1A-208ENST00000494728 CACNA1IQ9P0X4 2223 aa12.77□□□□□ -0.37
VTI1A-208ENST00000494728 FANCMQ8IYD8 2048 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 PTPRZ1P23471 2315 aaPredicted RBP12.76□□□□□ -0.37
VTI1A-208ENST00000494728 CCL16O15467 120 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 B3GAT3O94766 335 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 C1RP00736 705 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 C8AP07357 584 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 PLA2G4BP0C869 781 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 MCF2P10911 925 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 PLS3P13797 630 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 CREMQ03060 361 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 TDGQ13569 410 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 ZBTB41Q5SVQ8 909 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 GRASPQ7Z6J2 395 aaPredicted RBP12.76□□□□□ -0.37
VTI1A-208ENST00000494728 SLC7A14Q8TBB6 771 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 SPIRE2Q8WWL2 714 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 REEP2Q9BRK0 252 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 CCDC94Q9BW85 323 aaPredicted RBP12.76□□□□□ -0.37
VTI1A-208ENST00000494728 BLOC1S4Q9NUP1 217 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 HCFC1R1Q9NWW0 138 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 CNTN3Q9P232 1028 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 TUBGCP4Q9UGJ1 667 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 SMC3Q9UQE7 1217 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 CDY1Q9Y6F8 540 aa12.76□□□□□ -0.37
VTI1A-208ENST00000494728 KRBA1A5PL33 1030 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 H0Y858 1186 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 PODXLO00592 558 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 NRG2O14511 850 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-208ENST00000494728 PI15O43692 258 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 CFHP08603 1231 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 CXCL8P10145 99 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 KCNE1P15382 129 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 OR1D2P34982 312 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 NCKAP1LP55160 1127 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 SPAG1Q07617 926 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 HTR4Q13639 388 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 RAB33AQ14088 237 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 NOLC1Q14978 699 aaKnown RBP eCLIP12.75□□□□□ -0.37
VTI1A-208ENST00000494728 KARSQ15046 597 aaKnown RBP12.75□□□□□ -0.37
VTI1A-208ENST00000494728 SLC10A6Q3KNW5 377 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 LARP1BQ659C4 914 aaKnown RBP12.75□□□□□ -0.37
VTI1A-208ENST00000494728 ARL6IP4Q66PJ3 421 aaKnown RBP12.75□□□□□ -0.37
VTI1A-208ENST00000494728 DCLRE1AQ6PJP8 1040 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 CYP26C1Q6V0L0 522 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 SIX5Q8N196 739 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 ITFG1Q8TB96 612 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 NTPCRQ9BSD7 190 aaKnown RBP12.75□□□□□ -0.37
VTI1A-208ENST00000494728 RPP25Q9BUL9 199 aaKnown RBP12.75□□□□□ -0.37
VTI1A-208ENST00000494728 C17orf75Q9HAS0 396 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 PIDD1Q9HB75 910 aa12.75□□□□□ -0.37
VTI1A-208ENST00000494728 TICRRQ7Z2Z1 1910 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 WDR27A2RRH5 827 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 GALR2O43603 387 aaPredicted RBP12.74□□□□□ -0.37
VTI1A-208ENST00000494728 FAM189A1O60320 539 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 TOM1L1O75674 476 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 LAMP2P13473 410 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 PLCG1P19174 1290 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 TNFSF9P41273 254 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 YARSP54577 528 aaKnown RBP12.74□□□□□ -0.37
VTI1A-208ENST00000494728 ROR1Q01973 937 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 ELAVL2Q12926 359 aaKnown RBP12.74□□□□□ -0.37
VTI1A-208ENST00000494728 CUL4AQ13619 759 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 DHX8Q14562 1220 aaKnown RBP12.74□□□□□ -0.37
VTI1A-208ENST00000494728 LIN9Q5TKA1 542 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 ASTLQ6HA08 431 aaPredicted RBP12.74□□□□□ -0.37
VTI1A-208ENST00000494728 ELMSAN1Q6PJG2 1045 aa12.74□□□□□ -0.37
VTI1A-208ENST00000494728 USP49Q70CQ1 688 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms