RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 C5orf67F2Z3F1 127 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 I3L4J1 428 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 C2CD2LO14523 706 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 KIF4AO95239 1232 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
APTX-230ENST00000494649 GARTP22102 1010 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 MCM4P33991 863 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 PMS1P54277 932 aaKnown RBP12.09□□□□□ -0.47
APTX-230ENST00000494649 ERVFC1P60507 584 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 TUSC3Q13454 348 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 CAMK1Q14012 370 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 SCARA3Q6AZY7 606 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 RBM23Q86U06 439 aaKnown RBP12.09□□□□□ -0.47
APTX-230ENST00000494649 GPD1LQ8N335 351 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 SPPL3Q8TCT6 385 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 TMEM169Q96HH4 297 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 PDE11AQ9HCR9 933 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 MARCH5Q9NX47 278 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 SPG21Q9NZD8 308 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 CNTN3Q9P232 1028 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 UBE4BO95155 1302 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 CITO14578 2027 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 INPPL1O15357 1258 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 EXTL3O43909 919 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 EXOC3O60645 756 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 ADRB2P07550 413 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 CASP4P49662 377 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 PLPP4Q5VZY2 271 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 CEP135Q66GS9 1140 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 TAS1R1Q7RTX1 841 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 EFCAB13Q8IY85 973 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 C3orf58Q8NDZ4 430 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 CCDC127Q96BQ5 260 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 IGSF21Q96ID5 467 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 SAMD11Q96NU1 681 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 POP1Q99575 1024 aaKnown RBP12.09□□□□□ -0.47
APTX-230ENST00000494649 VN1R3Q9BXE9 311 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 KIAA1468Q9P260 1216 aa12.09□□□□□ -0.47
APTX-230ENST00000494649 B3GAT3O94766 335 aa12.08□□□□□ -0.48
APTX-230ENST00000494649 NR3C1P04150 777 aa12.08□□□□□ -0.48
APTX-230ENST00000494649 DLATP10515 647 aaKnown RBP12.08□□□□□ -0.48
APTX-230ENST00000494649 STX17P56962 302 aa12.08□□□□□ -0.48
APTX-230ENST00000494649 TFAMQ00059 246 aaKnown RBP12.08□□□□□ -0.48
APTX-230ENST00000494649 SNRNP35Q16560 246 aaKnown RBP12.08□□□□□ -0.48
APTX-230ENST00000494649 TCF25Q9BQ70 676 aa12.08□□□□□ -0.48
APTX-230ENST00000494649 PLVAPQ9BX97 442 aa12.08□□□□□ -0.48
APTX-230ENST00000494649 ENTPD7Q9NQZ7 604 aa12.08□□□□□ -0.48
APTX-230ENST00000494649 MTCH2Q9Y6C9 303 aa12.08□□□□□ -0.48
APTX-230ENST00000494649 RALGAPA2Q2PPJ7 1873 aa12.08□□□□□ -0.48
APTX-230ENST00000494649 PPEF2O14830 753 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 PER2O15055 1255 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 RB1P06400 928 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 GTF2F1P35269 517 aaKnown RBP eCLIP12.07□□□□□ -0.48
APTX-230ENST00000494649 KRT17Q04695 432 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 HSP90AA2PQ14568 343 aaPredicted RBP12.07□□□□□ -0.48
APTX-230ENST00000494649 XKR4Q5GH76 650 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 TMC7Q7Z402 723 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 ADGRD2Q7Z7M1 963 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 CEP57Q86XR8 500 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 VPS52Q8N1B4 723 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 GUF1Q8N442 669 aaKnown RBP12.07□□□□□ -0.48
APTX-230ENST00000494649 XXYLT1Q8NBI6 393 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 P2RX5Q93086 422 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 GPR62Q9BZJ7 368 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 CTNND2Q9UQB3 1225 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 PTPRJQ12913 1337 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 PODXLO00592 558 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 TADA2AO75478 443 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 LDHAP00338 332 aaKnown RBP12.07□□□□□ -0.48
APTX-230ENST00000494649 KCNE1P15382 129 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 NR2F2P24468 414 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 PPM1AP35813 382 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 BRCC3P46736 316 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 MORC3Q14149 939 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 TMEM132DQ14C87 1099 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 SKIV2LQ15477 1246 aaKnown RBP12.07□□□□□ -0.48
APTX-230ENST00000494649 EP400NLQ6ZTU2 488 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 GLYCTKQ8IVS8 523 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 BRSK2Q8IWQ3 736 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 ELOA2Q8IYF1 753 aaPredicted RBP12.07□□□□□ -0.48
APTX-230ENST00000494649 TMEM175Q9BSA9 504 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 IGFLR1Q9H665 355 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 TLR9Q9NR96 1032 aa12.07□□□□□ -0.48
APTX-230ENST00000494649 ZNF233A6NK53 670 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 HIDE1A8MVS5 230 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 PDXKO00764 312 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 CALUO43852 315 aaPredicted RBP12.06□□□□□ -0.48
APTX-230ENST00000494649 RBM10P98175 930 aaKnown RBP12.06□□□□□ -0.48
APTX-230ENST00000494649 KYAT1Q16773 422 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 UPP1Q16831 310 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 ANKRD40Q6AI12 368 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 ADSSL1Q8N142 457 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 MTMR12Q9C0I1 747 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 PLEKHA5Q9HAU0 1116 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 PUF60Q9UHX1 559 aaKnown RBP12.06□□□□□ -0.48
APTX-230ENST00000494649 ADAM28Q9UKQ2 775 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 KIF20AO95235 890 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 CDR1P51861 262 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 DLG4P78352 724 aa12.06□□□□□ -0.48
APTX-230ENST00000494649 PLCB3Q01970 1234 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms