RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 CCDC83Q8IWF9 413 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 GPR65Q8IYL9 337 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 FAM184AQ8NB25 1140 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 MCRS1Q96EZ8 462 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 TCHPQ9BT92 498 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 POLR3CQ9BUI4 534 aaPredicted RBP10.59□□□□□ -0.71
UBR4-216ENST00000494503 CCDC94Q9BW85 323 aaPredicted RBP10.59□□□□□ -0.71
UBR4-216ENST00000494503 BHMT2Q9H2M3 363 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 TOPORSQ9NS56 1045 aaPredicted RBP10.59□□□□□ -0.71
UBR4-216ENST00000494503 NCDNQ9UBB6 729 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 NUB1Q9Y5A7 615 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 CEP250Q9BV73 2442 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 ZNF292O60281 2723 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 MYH11P35749 1972 aa10.59□□□□□ -0.71
UBR4-216ENST00000494503 FANCMQ8IYD8 2048 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 OTOGLQ3ZCN5 2332 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 FAM170BA6NMN3 283 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 C1RP00736 705 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 EDN1P05305 212 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 RPA1P27694 616 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 HOXA9P31269 272 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 MATR3P43243 847 aaKnown RBP eCLIP10.58□□□□□ -0.72
UBR4-216ENST00000494503 BRCC3P46736 316 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 EFNA5P52803 228 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 PEX3P56589 373 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 SLC44A4Q53GD3 710 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 TTC38Q5R3I4 469 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 ANKS3Q6ZW76 656 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 NPAS3Q8IXF0 933 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 DCLK2Q8N568 766 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 SNX29Q8TEQ0 813 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 ATRIPQ8WXE1 791 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 RUBCNQ92622 972 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 KIFAP3Q92845 792 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 RMDN1Q96DB5 314 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 CORO1BQ9BR76 489 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 CYP4F11Q9HBI6 524 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 DNMT3BQ9UBC3 853 aaKnown RBP10.58□□□□□ -0.72
UBR4-216ENST00000494503 MTRRQ9UBK8 725 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 NOL7Q9UMY1 257 aaKnown RBP10.58□□□□□ -0.72
UBR4-216ENST00000494503 KIAA1024Q9UPX6 916 aa10.58□□□□□ -0.72
UBR4-216ENST00000494503 SPTBN2O15020 2390 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 PATJQ8NI35 1801 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 PODXLO00592 558 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 RHOP08100 348 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 GLULP15104 373 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 FGFR3P22607 806 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 IGFBP6P24592 240 aaPredicted RBP10.57□□□□□ -0.72
UBR4-216ENST00000494503 STARD6P59095 220 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 PRKCQQ04759 706 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 DMP1Q13316 513 aaPredicted RBP10.57□□□□□ -0.72
UBR4-216ENST00000494503 RAB33AQ14088 237 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 GRM2Q14416 872 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 NBR1Q14596 966 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 UVSSAQ2YD98 709 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 ZBTB41Q5SVQ8 909 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 ELMOD1Q8N336 334 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 CEP120Q8N960 986 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 SECISBP2LQ93073 1101 aaKnown RBP10.57□□□□□ -0.72
UBR4-216ENST00000494503 DDX27Q96GQ7 796 aaKnown RBP10.57□□□□□ -0.72
UBR4-216ENST00000494503 UROC1Q96N76 676 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 CCDC113Q9H0I3 377 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 HEBP1Q9NRV9 189 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 DDX19AQ9NUU7 478 aaKnown RBP10.57□□□□□ -0.72
UBR4-216ENST00000494503 ANKFY1Q9P2R3 1169 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 LRWD1Q9UFC0 647 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 NDRG2Q9UN36 371 aaKnown RBP10.57□□□□□ -0.72
UBR4-216ENST00000494503 MTF2Q9Y483 593 aaPredicted RBP10.57□□□□□ -0.72
UBR4-216ENST00000494503 DCHS1Q96JQ0 3298 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 NOTCH4Q99466 2003 aa10.57□□□□□ -0.72
UBR4-216ENST00000494503 TULP1O00294 542 aaPredicted RBP10.56□□□□□ -0.72
UBR4-216ENST00000494503 NCAM2O15394 837 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 CPB1P15086 417 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 CEBPBP17676 345 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 MCM4P33991 863 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 ROR1Q01973 937 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 NAB2Q15742 525 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 UPP1Q16831 310 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 SLC5A9Q2M3M2 681 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 CTXN3Q4LDR2 81 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 VARS2Q5ST30 1063 aaKnown RBP10.56□□□□□ -0.72
UBR4-216ENST00000494503 NT5DC1Q5TFE4 455 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 IQCEQ6IPM2 695 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 TSSK4Q6SA08 328 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 RSPO2Q6UXX9 243 aaPredicted RBP10.56□□□□□ -0.72
UBR4-216ENST00000494503 PDZD4Q76G19 769 aaPredicted RBP10.56□□□□□ -0.72
UBR4-216ENST00000494503 C3orf58Q8NDZ4 430 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 PPP1R10Q96QC0 940 aaKnown RBP10.56□□□□□ -0.72
UBR4-216ENST00000494503 MRPL4Q9BYD3 311 aaKnown RBP10.56□□□□□ -0.72
UBR4-216ENST00000494503 RAB34Q9BZG1 259 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 CDT1Q9H211 546 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 SLITRK6Q9H5Y7 841 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 BRD9Q9H8M2 597 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 LTB4R2Q9NPC1 389 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 KMT5AQ9NQR1 393 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 SLC38A7Q9NVC3 462 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 DLGAP2Q9P1A6 1054 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 KCNH3Q9ULD8 1083 aa10.56□□□□□ -0.72
UBR4-216ENST00000494503 MRPS17Q9Y2R5 130 aaKnown RBP10.56□□□□□ -0.72
UBR4-216ENST00000494503 GPR179Q6PRD1 2367 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms