RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 SF3B1O75533 1304 aaKnown RBP eCLIP16.05■□□□□ 0.167e-7■■■■□ 20.8
ATG4B-224ENST00000494132 SPDYE4A6NLX3 237 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 TEX28O15482 410 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 SPATA31D3P0C874 917 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 BRCC3P46736 316 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 CLCN4P51793 760 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 CASP5P51878 434 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 KCNA1Q09470 495 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 USP41Q3LFD5 358 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 XKR4Q5GH76 650 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 SPATA31D4Q6ZUB0 917 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 ZNF720Q7Z2F6 126 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 MAP4K3Q8IVH8 894 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 HPS3Q969F9 1004 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 S1PR5Q9H228 398 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 CHST7Q9NS84 486 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 PANK4Q9NVE7 773 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 CNTN3Q9P232 1028 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 CFAP45Q9UL16 551 aa16.05■□□□□ 0.16
ATG4B-224ENST00000494132 POLR2DO15514 142 aaKnown RBP16.04■□□□□ 0.16
ATG4B-224ENST00000494132 B3GAT3O94766 335 aa16.04■□□□□ 0.16
ATG4B-224ENST00000494132 GCNT3O95395 438 aa16.04■□□□□ 0.16
ATG4B-224ENST00000494132 PIGRP01833 764 aa16.04■□□□□ 0.16
ATG4B-224ENST00000494132 CASP1P29466 404 aa16.04■□□□□ 0.16
ATG4B-224ENST00000494132 UPP1Q16831 310 aa16.04■□□□□ 0.16
ATG4B-224ENST00000494132 HERC4Q5GLZ8 1057 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-224ENST00000494132 CD300LGQ6UXG3 332 aa16.04■□□□□ 0.16
ATG4B-224ENST00000494132 PALB2Q86YC2 1186 aa16.04■□□□□ 0.16
ATG4B-224ENST00000494132 ADHFE1Q8IWW8 467 aa16.04■□□□□ 0.16
ATG4B-224ENST00000494132 KCNN1Q92952 543 aa16.04■□□□□ 0.16
ATG4B-224ENST00000494132 FAM212AQ96EL1 285 aa16.04■□□□□ 0.16
ATG4B-224ENST00000494132 RPGRIP1Q96KN7 1286 aa16.04■□□□□ 0.16
ATG4B-224ENST00000494132 MSTO1Q9BUK6 570 aa16.04■□□□□ 0.16
ATG4B-224ENST00000494132 STK39Q9UEW8 545 aa16.04■□□□□ 0.16
ATG4B-224ENST00000494132 TUBGCP4Q9UGJ1 667 aa16.04■□□□□ 0.16
ATG4B-224ENST00000494132 PODXLO00592 558 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 FAM189A1O60320 539 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 PPP1R37O75864 691 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 KCNE1P15382 129 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 GAP43P17677 238 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 GUCY2FP51841 1108 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 BECN1Q14457 450 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 RESP18Q5W5W9 173 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 TMC5Q6UXY8 1006 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 GLIS3Q8NEA6 775 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 SUSD6Q92537 303 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 FBXL18Q96ME1 805 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 BLZF1Q9H2G9 400 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 TNMDQ9H2S6 317 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 EPHX3Q9H6B9 360 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 RXFP1Q9HBX9 757 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 MAN1C1Q9NR34 630 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 FAM13BQ9NYF5 915 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 PRKAG3Q9UGI9 489 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 RCOR1Q9UKL0 485 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 BDP1A6H8Y1 2624 aa16.03■□□□□ 0.16
ATG4B-224ENST00000494132 FRMD3A2A2Y4 597 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 LACTBL1A8MY62 500 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 TULP1O00294 542 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-224ENST00000494132 OGTO15294 1046 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 PRPF6O94906 941 aaKnown RBP16.02■□□□□ 0.16
ATG4B-224ENST00000494132 ADH1AP07327 375 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 CLTAP09496 248 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 HOXB8P17481 243 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-224ENST00000494132 TKTP29401 623 aaKnown RBP16.02■□□□□ 0.16
ATG4B-224ENST00000494132 AFMP43652 599 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 ACOT2P49753 483 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 ASIC1P78348 528 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 KRT85P78386 507 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 PPP2R3AQ06190 1150 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 CBX2Q14781 532 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-224ENST00000494132 ENOX2Q16206 610 aaKnown RBP16.02■□□□□ 0.16
ATG4B-224ENST00000494132 PSMD5Q16401 504 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 ATL3Q6DD88 541 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 ADALQ6DHV7 355 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 DCLRE1AQ6PJP8 1040 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 PPFIBP1Q86W92 1011 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 GRAMD1CQ8IYS0 662 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 IQUBQ8NA54 791 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 ZSWIM2Q8NEG5 633 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 LEO1Q8WVC0 666 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-224ENST00000494132 KIF12Q96FN5 646 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 SPATA32Q96LK8 384 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 TTPALQ9BTX7 342 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 ST6GALNAC4Q9H4F1 302 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 RPF1Q9H9Y2 349 aaKnown RBP16.02■□□□□ 0.16
ATG4B-224ENST00000494132 SLC38A7Q9NVC3 462 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 KBTBD4Q9NVX7 518 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 SEL1LQ9UBV2 794 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 SSX2IPQ9Y2D8 614 aa16.02■□□□□ 0.16
ATG4B-224ENST00000494132 TSC2P49815 1807 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 A0A0B4J269 797 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 A0A1B0GVL5 298 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 TTC26A0AVF1 554 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 C19orf67A6NJJ6 358 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 TMEM189-UBE2V1I3L0A0 370 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 ADAM12O43184 909 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 RFPL2O75678 378 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 GLUD1P00367 558 aa16.01■□□□□ 0.15
ATG4B-224ENST00000494132 L1TD1Q5T7N2 865 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms