RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ZMAT2Q96NC0 199 aaKnown RBP15.79■□□□□ 0.12
BRCA1-223ENST00000494123 PPP1R10Q96QC0 940 aaKnown RBP15.79■□□□□ 0.12
BRCA1-223ENST00000494123 MED15Q96RN5 788 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 DERAQ9Y315 318 aa15.79■□□□□ 0.12
BRCA1-223ENST00000494123 MRPL42Q9Y6G3 142 aaKnown RBP15.79■□□□□ 0.12
BRCA1-223ENST00000494123 RANBP2P49792 3224 aaKnown RBP15.78■□□□□ 0.12
BRCA1-223ENST00000494123 GNA14O95837 355 aa15.78■□□□□ 0.12
BRCA1-223ENST00000494123 NFICP08651 508 aa15.78■□□□□ 0.12
BRCA1-223ENST00000494123 TNNI1P19237 187 aa15.78■□□□□ 0.12
BRCA1-223ENST00000494123 TFAMQ00059 246 aaKnown RBP15.78■□□□□ 0.12
BRCA1-223ENST00000494123 SPATA1Q5VX52 437 aa15.78■□□□□ 0.12
BRCA1-223ENST00000494123 NT5DC4Q86YG4 428 aa15.78■□□□□ 0.12
BRCA1-223ENST00000494123 ZNF280BQ86YH2 543 aa15.78■□□□□ 0.12
BRCA1-223ENST00000494123 CREBRFQ8IUR6 639 aa15.78■□□□□ 0.12
BRCA1-223ENST00000494123 BEST2Q8NFU1 509 aa15.78■□□□□ 0.12
BRCA1-223ENST00000494123 ENOX1Q8TC92 643 aaKnown RBP15.78■□□□□ 0.12
BRCA1-223ENST00000494123 CACTINQ8WUQ7 758 aaKnown RBP15.78■□□□□ 0.12
BRCA1-223ENST00000494123 NKX2-4Q9H2Z4 354 aa15.78■□□□□ 0.12
BRCA1-223ENST00000494123 AAASQ9NRG9 546 aa15.78■□□□□ 0.12
BRCA1-223ENST00000494123 HCSTQ9UBK5 93 aa15.78■□□□□ 0.12
BRCA1-223ENST00000494123 ARMCX3Q9UH62 379 aaPredicted RBP15.78■□□□□ 0.12
BRCA1-223ENST00000494123 UBQLN1Q9UMX0 589 aaKnown RBP15.78■□□□□ 0.12
BRCA1-223ENST00000494123 YBX2Q9Y2T7 364 aaKnown RBP15.78■□□□□ 0.12
BRCA1-223ENST00000494123 C2CD2Q9Y426 696 aa15.78■□□□□ 0.12
BRCA1-223ENST00000494123 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.78■□□□□ 0.12
BRCA1-223ENST00000494123 LINC01553A4QN01 128 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 DDHD2O94830 711 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 TMEM191BP0C7N4 346 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 LAG3P18627 525 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 DNAJB2P25686 324 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 ZNF165P49910 485 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 VAMP7P51809 220 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 WNT7BP56706 349 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 MYL5Q02045 173 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 BFSP1Q12934 665 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 TUSC3Q13454 348 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 LRSAM1Q6UWE0 723 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 WDR49Q8IV35 697 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 FAM114A1Q8IWE2 563 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 C18orf25Q96B23 403 aaPredicted RBP15.77■□□□□ 0.12
BRCA1-223ENST00000494123 ANKRD36BP1Q96IX9 119 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 CGRRF1Q99675 332 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 CWH43Q9H720 699 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 NRDE2Q9H7Z3 1164 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 SLC28A3Q9HAS3 691 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 METTL14Q9HCE5 456 aaKnown RBP15.77■□□□□ 0.12
BRCA1-223ENST00000494123 MAGEC2Q9UBF1 373 aaPredicted RBP15.77■□□□□ 0.12
BRCA1-223ENST00000494123 NFE2L3Q9Y4A8 694 aa15.77■□□□□ 0.12
BRCA1-223ENST00000494123 KIAA1671Q9BY89 1806 aa15.77■□□□□ 0.11
BRCA1-223ENST00000494123 CASTOR2A6NHX0 329 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 CAVIN2O95810 425 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 TNNC2P02585 160 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 OR1G1P47890 313 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 ALDH7A1P49419 539 aaKnown RBP15.76■□□□□ 0.11
BRCA1-223ENST00000494123 TCERG1LQ5VWI1 586 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 PPP2R2DQ66LE6 453 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 LMBRD2Q68DH5 695 aaPredicted RBP15.76■□□□□ 0.11
BRCA1-223ENST00000494123 FRMD5Q7Z6J6 570 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 EFCAB13Q8IY85 973 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 COLGALT2Q8IYK4 626 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 AOPEPQ8N6M6 819 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 TMC2Q8TDI7 906 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 PARD3BQ8TEW8 1205 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 ZNF558Q96NG5 402 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 BPIFA3Q9BQP9 254 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 TMEM175Q9BSA9 504 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 TSPY26PQ9H489 355 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 THAP9Q9H5L6 903 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 GOLGA2P5Q9HBQ8 144 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 DNAJB4Q9UDY4 337 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 TUBGCP4Q9UGJ1 667 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 RWDD3Q9Y3V2 267 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 TRIOBPQ9H2D6 2365 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 NLRC5Q86WI3 1866 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 CARNS1A5YM72 827 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 LRRIQ3A6PVS8 624 aaPredicted RBP15.76■□□□□ 0.11
BRCA1-223ENST00000494123 SMTNL1A8MU46 457 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 BECN2A8MW95 431 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 ALDH2P05091 517 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 CYP3A5P20815 502 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 DSC1Q08554 894 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 NAB2Q15742 525 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 DUOXA2Q1HG44 320 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 DCAF17Q5H9S7 520 aaPredicted RBP15.76■□□□□ 0.11
BRCA1-223ENST00000494123 TIFAQ96CG3 184 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 CNOT6LQ96LI5 555 aaKnown RBP15.76■□□□□ 0.11
BRCA1-223ENST00000494123 UROC1Q96N76 676 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 POP1Q99575 1024 aaKnown RBP15.76■□□□□ 0.11
BRCA1-223ENST00000494123 INTS13Q9NVM9 706 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 DPP3Q9NY33 737 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 R3HCC1Q9Y3T6 440 aaKnown RBP15.76■□□□□ 0.11
BRCA1-223ENST00000494123 PCDHB12Q9Y5F1 795 aa15.76■□□□□ 0.11
BRCA1-223ENST00000494123 STX10O60499 249 aa15.75■□□□□ 0.11
BRCA1-223ENST00000494123 B4GALT3O60512 393 aa15.75■□□□□ 0.11
BRCA1-223ENST00000494123 CTNNB1P35222 781 aa15.75■□□□□ 0.11
BRCA1-223ENST00000494123 AP3M2P53677 418 aa15.75■□□□□ 0.11
BRCA1-223ENST00000494123 BCAR1P56945 870 aa15.75■□□□□ 0.11
BRCA1-223ENST00000494123 DLG4P78352 724 aa15.75■□□□□ 0.11
BRCA1-223ENST00000494123 SOX4Q06945 474 aaPredicted RBP15.75■□□□□ 0.11
BRCA1-223ENST00000494123 ZBTB6Q15916 424 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms