RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 RASSF3Q86WH2 238 aa20.2■□□□□ 0.82
COL27A1-207ENST00000494090 RASA1P20936 1047 aa20.2■□□□□ 0.82
COL27A1-207ENST00000494090 MMGT1Q8N4V1 131 aa20.2■□□□□ 0.82
COL27A1-207ENST00000494090 EHD2Q9NZN4 543 aa20.2■□□□□ 0.82
COL27A1-207ENST00000494090 E2F6O75461 281 aa20.2■□□□□ 0.82
COL27A1-207ENST00000494090 ZBTB7AO95365 584 aa20.2■□□□□ 0.82
COL27A1-207ENST00000494090 ACTN3Q08043 901 aaPredicted RBP20.2■□□□□ 0.82
COL27A1-207ENST00000494090 AP1B1Q10567 949 aa20.2■□□□□ 0.82
COL27A1-207ENST00000494090 RAB42Q8N4Z0 105 aa20.2■□□□□ 0.82
COL27A1-207ENST00000494090 LZICQ8WZA0 190 aa20.2■□□□□ 0.82
COL27A1-207ENST00000494090 PRMT1Q99873 361 aaKnown RBP20.2■□□□□ 0.82
COL27A1-207ENST00000494090 TRIM51Q9BSJ1 452 aa20.2■□□□□ 0.82
COL27A1-207ENST00000494090 HNRNPCL2B2RXH8 293 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 APOL1O14791 398 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 MAGEB2O15479 319 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 HNRNPCL1O60812 293 aaKnown RBP20.19■□□□□ 0.82
COL27A1-207ENST00000494090 OR6J1Q8NGC5 347 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 ERGIC2Q96RQ1 377 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 SPON2Q9BUD6 331 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 TRABDQ9H4I3 376 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 DYRK4Q9NR20 520 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 FHOD1Q9Y613 1164 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 KCNQ2O43526 872 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 ZBTB17Q13105 803 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 FAM161BQ96MY7 647 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 CCT8L2Q96SF2 557 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 ASPSCR1Q9BZE9 553 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 SLC13A1Q9BZW2 595 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 SMARCAD1Q9H4L7 1026 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 PITPNM2Q9BZ72 1349 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 EIF3DO15371 548 aaKnown RBP eCLIP20.19■□□□□ 0.828e-7■□□□□ 10.6
COL27A1-207ENST00000494090 DIAPH2O60879 1101 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 PDHBP11177 359 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 RBP5P82980 135 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 PDIA6Q15084 440 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 RNF149Q8NC42 400 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 TJP2Q9UDY2 1190 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 PYGLP06737 847 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 EEF1DP29692 281 aaKnown RBP20.19■□□□□ 0.82
COL27A1-207ENST00000494090 EIF3EP60228 445 aaKnown RBP20.19■□□□□ 0.82
COL27A1-207ENST00000494090 MAPRE2Q15555 327 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 SH2D3CQ8N5H7 860 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 CEP19Q96LK0 163 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 EGFL8Q99944 293 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 CEMIPQ8WUJ3 1361 aa20.19■□□□□ 0.82
COL27A1-207ENST00000494090 TCP11X1B4DZS4 312 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 CYBBP04839 570 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 MYBP10242 640 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 HMGCS2P54868 508 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 GPBP1L1Q9HC44 474 aaPredicted RBP20.18■□□□□ 0.82
COL27A1-207ENST00000494090 CFAP69A5D8W1 941 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 TMEM253P0C7T8 217 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 NME3Q13232 169 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 LAMB3Q13751 1172 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 CAPRIN1Q14444 709 aaKnown RBP20.18■□□□□ 0.82
COL27A1-207ENST00000494090 RGS9BPQ6ZS82 235 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 CCNYL1Q8N7R7 359 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 PSD3Q9NYI0 1048 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 CPS1P31327 1500 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 STK25O00506 426 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 NDUFB10O96000 172 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 LCA5Q86VQ0 697 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 HNRNPLLQ8WVV9 542 aaKnown RBP20.18■□□□□ 0.82
COL27A1-207ENST00000494090 SENP7Q9BQF6 1050 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 INO80Q9ULG1 1556 aaPredicted RBP20.18■□□□□ 0.82
COL27A1-207ENST00000494090 CDH16O75309 829 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 CHN1P15882 459 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 FBXO33Q7Z6M2 555 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 MKNK1Q9BUB5 465 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 WWP1Q9H0M0 922 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 PCDHB8Q9UN66 801 aa20.18■□□□□ 0.82
COL27A1-207ENST00000494090 KCNV2Q8TDN2 545 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 A0A0G2JLW4 131 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 TYK2P29597 1187 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 MTHFD1LQ6UB35 978 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 HHIPL2Q6UWX4 724 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 PPP1R2P1Q96PQ5 205 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 POU5F1BQ06416 359 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 EFTUD2Q15029 972 aaKnown RBP eCLIP20.17■□□□□ 0.822e-7■■■■□ 25.4
COL27A1-207ENST00000494090 DAGLBQ8NCG7 672 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 PPCSQ9HAB8 311 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 PPRC1Q5VV67 1664 aaKnown RBP20.17■□□□□ 0.82
COL27A1-207ENST00000494090 MOCS2O96007 188 aaPredicted RBP20.17■□□□□ 0.82
COL27A1-207ENST00000494090 RFC5P40937 340 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 HADHAP40939 763 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 SNRPFP62306 86 aaKnown RBP20.17■□□□□ 0.82
COL27A1-207ENST00000494090 LMBRD2Q68DH5 695 aaPredicted RBP20.17■□□□□ 0.82
COL27A1-207ENST00000494090 OR6P1Q8NGX9 317 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 RAD51CO43502 376 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 MCF2P10911 925 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 SLC9A1P19634 815 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 ACCSLQ4AC99 568 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 ZBTB41Q5SVQ8 909 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 SPATA2LQ8IUW3 424 aaPredicted RBP20.17■□□□□ 0.82
COL27A1-207ENST00000494090 SEPT1Q8WYJ6 367 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 C18orf8Q96DM3 657 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 FOXP3Q9BZS1 431 aa20.17■□□□□ 0.82
COL27A1-207ENST00000494090 JCADQ9P266 1359 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 C1orf167Q5SNV9 1468 aa20.16■□□□□ 0.82
COL27A1-207ENST00000494090 PTPAQ15257 358 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms