RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 AFG1LQ8WV93 481 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 CPLX3Q8WVH0 158 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 MRPL4Q9BYD3 311 aaKnown RBP7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 TSPYL1Q9H0U9 437 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 TUT1Q9H6E5 874 aaKnown RBP7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 CASP8AP2Q9UKL3 1982 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 SSU72P8A0A1W2PR75 194 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 ZNF233A6NK53 670 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 SLC4A1P02730 911 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 ZNF865P0CJ78 1059 aaPredicted RBP7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 GNAT1P11488 350 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 SMPD1P17405 629 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 SERPINB3P29508 390 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 MAN1A1P33908 653 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 PHKA2P46019 1235 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 FMO5P49326 533 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 NKX3-2P78367 333 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 PTPN14Q15678 1187 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 MAPK6Q16659 721 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 FAM187BQ17R55 369 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 C21orf62-AS1Q17RA5 79 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 DCAF17Q5H9S7 520 aaPredicted RBP7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 ZNF410Q86VK4 478 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 PRR7Q8TB68 274 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 BSNDQ8WZ55 320 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 POMGNT1Q8WZA1 660 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 COPS5Q92905 334 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 PRIMPOLQ96LW4 560 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 MFSD14AQ96MC6 490 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 PRMT7Q9NVM4 692 aaPredicted RBP7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 COMMD8Q9NX08 183 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 SUCLA2Q9P2R7 463 aaPredicted RBP7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 LIMD1Q9UGP4 676 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 MAFFQ9ULX9 164 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 PAXBP1Q9Y5B6 917 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 NRCAMQ92823 1304 aa7.23□□□□□ -1.25
FNDC3B-212ENST00000494000 ZSWIM8A7E2V4 1837 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 SORBS3O60504 671 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 SNX2O60749 519 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 ZC3H11AO75152 810 aaKnown RBP eCLIP7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 DUSP11O75319 330 aaKnown RBP7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 GFPT2O94808 682 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 COL6A1P12109 1028 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 PEX19P40855 299 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 RAB27AP51159 221 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 PRMT2P55345 433 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 TSPY1Q01534 308 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 LAMTOR4Q0VGL1 99 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 KCNMA1Q12791 1236 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 TMEM95Q3KNT9 176 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 SLC9C1Q4G0N8 1177 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 C10orf76Q5T2E6 689 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 SFMBT2Q5VUG0 894 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 EFCAB12Q6NXP0 572 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 CAPN12Q6ZSI9 719 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 MGARPQ8TDB4 240 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 ASAP3Q8TDY4 903 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 PRPF31Q8WWY3 499 aaKnown RBP7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 TMEM143Q96AN5 459 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 C16orf70Q9BSU1 422 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 LSM14BQ9BX40 385 aaKnown RBP7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 AIPL1Q9NZN9 384 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 MYO1AQ9UBC5 1043 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 ATP8B3O60423 1300 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 ZBTB42B2RXF5 422 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 EIF3CLB5ME19 914 aaKnown RBP7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 TOM1L1O75674 476 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 C22orf31O95567 290 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 F2P00734 622 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 PGRP06401 933 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 INSRRP14616 1297 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 STT3AP46977 705 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 CASP4P49662 377 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 LACTBP83111 547 aaPredicted RBP7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 MYL7Q01449 175 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 CAPSQ13938 189 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 PKN2Q16513 984 aaKnown RBP7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 SNRNP35Q16560 246 aaKnown RBP7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 E4F1Q66K89 784 aaPredicted RBP7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 CCBE1Q6UXH8 406 aaPredicted RBP7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 FAM47EQ6ZV65 393 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 RTL10Q7L3V2 364 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 ENOSF1Q7L5Y1 443 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 SRGAP1Q7Z6B7 1085 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 TLK2Q86UE8 772 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 VPS36Q86VN1 386 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 LINC01465Q8N7H1 131 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 UBR7Q8N806 425 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 EHBP1Q8NDI1 1231 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 GOLGA1Q92805 767 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 CAPNS2Q96L46 248 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 EIF3CQ99613 913 aaKnown RBP7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 TSGA10Q9BZW7 698 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 TMEM8AQ9HCN3 771 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 POLD4Q9HCU8 107 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 AGO2Q9UKV8 859 aaKnown RBP7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 PPP2R2CQ9Y2T4 447 aa7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 EPN1Q9Y6I3 576 aaPredicted RBP7.22□□□□□ -1.25
FNDC3B-212ENST00000494000 CCDC66A2RUB6 948 aa7.21□□□□□ -1.25
FNDC3B-212ENST00000494000 PABPN1LA6NDY0 278 aaKnown RBP7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms