RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 DGAT1O75907 488 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 SKIP12755 728 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 OR1G1P47890 313 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 CLCN4P51793 760 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 CORO7P57737 925 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 TTC38Q5R3I4 469 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 TMC5Q6UXY8 1006 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 KCNK18Q7Z418 384 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 RNF168Q8IYW5 571 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-234ENST00000493923 TMEM130Q8N3G9 435 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 ZNF592Q92610 1267 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 CASP10Q92851 521 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 PGBD4Q96DM1 585 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 DRC1Q96MC2 740 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 POLR3CQ9BUI4 534 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-234ENST00000493923 TRIM5Q9C035 493 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 ADAM7Q9H2U9 754 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 PDZD7Q9H5P4 517 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 DDX19AQ9NUU7 478 aaKnown RBP8.94□□□□□ -0.98
HDAC6-234ENST00000493923 IMPACTQ9P2X3 320 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 KCNG1Q9UIX4 513 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 SUFUQ9UMX1 484 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 FAN1Q9Y2M0 1017 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 PCDHB6Q9Y5E3 794 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 PHLPP2Q6ZVD8 1323 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 CNTNAP2Q9UHC6 1331 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 USP34Q70CQ2 3546 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 VPS13AQ96RL7 3174 aa8.94□□□□□ -0.98
HDAC6-234ENST00000493923 LRRIQ4A6NIV6 560 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 EFCAB8A8MWE9 144 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 PTGESO14684 152 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 N4BP1O75113 896 aaKnown RBP8.93□□□□□ -0.98
HDAC6-234ENST00000493923 ERLIN2O94905 339 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 CLSTN1O94985 981 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 OR52Z1P0C646 297 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 SPATA31D3P0C874 917 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 ZSCAN22P10073 491 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-234ENST00000493923 HOXB8P17481 243 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-234ENST00000493923 RPL17P18621 184 aaKnown RBP8.93□□□□□ -0.98
HDAC6-234ENST00000493923 OAS2P29728 719 aaKnown RBP8.93□□□□□ -0.98
HDAC6-234ENST00000493923 CDC25AP30304 524 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 NHLH1Q02575 133 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 POU5F1BQ06416 359 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 TRIM29Q14134 588 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 MXD4Q14582 209 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-234ENST00000493923 NAB2Q15742 525 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 PTPN21Q16825 1174 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 NT5DC1Q5TFE4 455 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 KIAA0319Q5VV43 1072 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 CDCA2Q69YH5 1023 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-234ENST00000493923 NOTUMQ6P988 496 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 SPATA31D4Q6ZUB0 917 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 CCDC150Q8NCX0 1101 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 URGCPQ8TCY9 931 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 PLCD4Q9BRC7 762 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 TMEM175Q9BSA9 504 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 MMTAG2Q9BU76 263 aaKnown RBP8.93□□□□□ -0.98
HDAC6-234ENST00000493923 HERC2P3Q9BVR0 1158 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 GPR62Q9BZJ7 368 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 CCDC113Q9H0I3 377 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 NUP62CLQ9H1M0 184 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 FOXP1Q9H334 677 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-234ENST00000493923 FZD8Q9H461 694 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 TUFT1Q9NNX1 390 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 DBR1Q9UK59 544 aaKnown RBP8.93□□□□□ -0.98
HDAC6-234ENST00000493923 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.93□□□□□ -0.985e-19■■■■□ 25.6
HDAC6-234ENST00000493923 PTPRZ1P23471 2315 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-234ENST00000493923 MYO15AQ9UKN7 3530 aa8.93□□□□□ -0.98
HDAC6-234ENST00000493923 SPTBN4Q9H254 2564 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 NOTCH4Q99466 2003 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-234ENST00000493923 A0A1B0GUA9 196 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 TEX28O15482 410 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 GADD45BO75293 160 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-234ENST00000493923 RFPL2O75678 378 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 SOD2P04179 222 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 ALDH2P05091 517 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 TUBBP07437 444 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 CYP11B2P19099 503 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 RPA1P27694 616 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 AXLP30530 894 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 IRX1P78414 480 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-234ENST00000493923 SNW1Q13573 536 aaKnown RBP8.92□□□□□ -0.98
HDAC6-234ENST00000493923 TFDP1Q14186 410 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 TPRNQ4KMQ1 711 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 KIAA1841Q6NSI8 718 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 PADI6Q6TGC4 694 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 CD300LGQ6UXG3 332 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 TAS1R3Q7RTX0 852 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 ALYREFQ86V81 257 aaKnown RBP8.92□□□□□ -0.98
HDAC6-234ENST00000493923 NOSTRINQ8IVI9 506 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 GLYCTKQ8IVS8 523 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 EXOC8Q8IYI6 725 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 DAW1Q8N136 415 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 CCAR2Q8N163 923 aaKnown RBP8.92□□□□□ -0.98
HDAC6-234ENST00000493923 GPR161Q8N6U8 529 aaKnown RBP8.92□□□□□ -0.98
HDAC6-234ENST00000493923 KREMEN2Q8NCW0 462 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 ST13P5Q8NFI4 369 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-234ENST00000493923 LRRC15Q8TF66 581 aa8.92□□□□□ -0.98
HDAC6-234ENST00000493923 HASPINQ8TF76 798 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms