RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 TTI2Q6NXR4 508 aa19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 KCNT2Q6UVM3 1135 aa19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 TMEM173Q86WV6 379 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 EFCAB13Q8IY85 973 aa19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 CCDC127Q96BQ5 260 aa19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 MED15Q96RN5 788 aa19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 DUSP9Q99956 384 aaKnown RBP19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 KIAA1586Q9HCI6 787 aa19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 PRG3Q9Y2Y8 225 aaPredicted RBP19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 TRIP11Q15643 1979 aa19.41■□□□□ 0.7
PDLIM7-208ENST00000493815 GALTP07902 379 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 LAG3P18627 525 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 PPP1R2P41236 205 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 OR1G1P47890 313 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 ALDH7A1P49419 539 aaKnown RBP19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 FXR1P51114 621 aaKnown RBP eCLIP19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 CYP24A1Q07973 514 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 Q7L0L9 218 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 RSPH1Q8WYR4 309 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 ZNF558Q96NG5 402 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 POP1Q99575 1024 aaKnown RBP19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 CITO14578 2027 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 PTPRJQ12913 1337 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 SYCE3A1L190 88 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 NRP1O14786 923 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 CSPG5O95196 566 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 DLATP10515 647 aaKnown RBP19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 RPL13P26373 211 aaKnown RBP19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 LRRC63Q05C16 580 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 TUSC3Q13454 348 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 TMEM132DQ14C87 1099 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 NFIL3Q16649 462 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 PLEKHO2Q8TD55 490 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 TMEM174Q8WUU8 243 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 BCL7CQ8WUZ0 217 aaPredicted RBP19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 FRMD4BQ9Y2L6 1034 aa19.4■□□□□ 0.7
PDLIM7-208ENST00000493815 IL18RAPO95256 599 aa19.39■□□□□ 0.69
PDLIM7-208ENST00000493815 ALDH2P05091 517 aa19.39■□□□□ 0.69
PDLIM7-208ENST00000493815 CLCNKBP51801 687 aa19.39■□□□□ 0.69
PDLIM7-208ENST00000493815 TFAMQ00059 246 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-208ENST00000493815 FKBP3Q00688 224 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-208ENST00000493815 MYBPC2Q14324 1141 aa19.39■□□□□ 0.69
PDLIM7-208ENST00000493815 ZBTB6Q15916 424 aa19.39■□□□□ 0.69
PDLIM7-208ENST00000493815 CD302Q8IX05 232 aa19.39■□□□□ 0.69
PDLIM7-208ENST00000493815 KLHL23Q8NBE8 558 aa19.39■□□□□ 0.69
PDLIM7-208ENST00000493815 HASPINQ8TF76 798 aa19.39■□□□□ 0.69
PDLIM7-208ENST00000493815 GZF1Q9H116 711 aaPredicted RBP19.39■□□□□ 0.69
PDLIM7-208ENST00000493815 ASB7Q9H672 318 aa19.39■□□□□ 0.69
PDLIM7-208ENST00000493815 ALG13Q9NP73 1137 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-208ENST00000493815 PCDHB12Q9Y5F1 795 aa19.39■□□□□ 0.69
PDLIM7-208ENST00000493815 KIAA1671Q9BY89 1806 aa19.38■□□□□ 0.69
PDLIM7-208ENST00000493815 TDRD15B5MCY1 1934 aaKnown RBP19.38■□□□□ 0.69
PDLIM7-208ENST00000493815 BICDL2A1A5D9 508 aa19.38■□□□□ 0.69
PDLIM7-208ENST00000493815 CETN3O15182 167 aa19.38■□□□□ 0.69
PDLIM7-208ENST00000493815 TYRO3Q06418 890 aa19.38■□□□□ 0.69
PDLIM7-208ENST00000493815 GRIN2CQ14957 1233 aa19.38■□□□□ 0.69
PDLIM7-208ENST00000493815 ZNF697Q5TEC3 545 aa19.38■□□□□ 0.69
PDLIM7-208ENST00000493815 SCARA3Q6AZY7 606 aa19.38■□□□□ 0.69
PDLIM7-208ENST00000493815 C11orf57Q6ZUT1 292 aaPredicted RBP19.38■□□□□ 0.69
PDLIM7-208ENST00000493815 FBXO22Q8NEZ5 403 aa19.38■□□□□ 0.69
PDLIM7-208ENST00000493815 GDPD5Q8WTR4 605 aa19.38■□□□□ 0.69
PDLIM7-208ENST00000493815 MFSD14AQ96MC6 490 aa19.38■□□□□ 0.69
PDLIM7-208ENST00000493815 AAASQ9NRG9 546 aa19.38■□□□□ 0.69
PDLIM7-208ENST00000493815 SLC38A7Q9NVC3 462 aa19.38■□□□□ 0.69
PDLIM7-208ENST00000493815 RWDD2AQ9UIY3 292 aa19.38■□□□□ 0.69
PDLIM7-208ENST00000493815 FAN1Q9Y2M0 1017 aa19.38■□□□□ 0.69
PDLIM7-208ENST00000493815 ITGB1P05556 798 aa19.37■□□□□ 0.69
PDLIM7-208ENST00000493815 DLG4P78352 724 aa19.37■□□□□ 0.69
PDLIM7-208ENST00000493815 POU5F1Q01860 360 aaKnown RBP19.37■□□□□ 0.69
PDLIM7-208ENST00000493815 PSMD6Q15008 389 aa19.37■□□□□ 0.69
PDLIM7-208ENST00000493815 FAM186BQ8IYM0 893 aa19.37■□□□□ 0.69
PDLIM7-208ENST00000493815 CSGALNACT2Q8N6G5 542 aa19.37■□□□□ 0.69
PDLIM7-208ENST00000493815 OR5B17Q8NGF7 314 aa19.37■□□□□ 0.69
PDLIM7-208ENST00000493815 PRDM12Q9H4Q4 367 aa19.37■□□□□ 0.69
PDLIM7-208ENST00000493815 FGF18O76093 207 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 PSMC2P35998 433 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 STX1AQ16623 288 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 ZSCAN23Q3MJ62 389 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 ZC3H3Q8IXZ2 948 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 SLC39A11Q8N1S5 342 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 FNBP1Q96RU3 617 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 TMEM175Q9BSA9 504 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 SRRTQ9BXP5 876 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 MTMR12Q9C0I1 747 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 DNAJC25Q9H1X3 360 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 ANO10Q9NW15 660 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 MARCH5Q9NX47 278 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 SPG21Q9NZD8 308 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 UBQLN1Q9UMX0 589 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 RWDD3Q9Y3V2 267 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 C2CD2Q9Y426 696 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 TRANK1O15050 2925 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 ANK1P16157 1881 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 C5orf67F2Z3F1 127 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 PPEF2O14830 753 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 GRM6O15303 877 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 KIF4AO95239 1232 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 TNNI1P19237 187 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 UPP1Q16831 310 aa19.36■□□□□ 0.69
PDLIM7-208ENST00000493815 SPATA1Q5VX52 437 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms