RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 PIK3CAP42336 1068 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 PTGIRP43119 386 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 MAGEA9P43362 315 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 CCT5P48643 541 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 PPP2R2AP63151 447 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 CAV1Q03135 178 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 CALCOCO2Q13137 446 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 PDCLQ13371 301 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 SURF1Q15526 300 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 KRT71Q3SY84 523 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 DENND2CQ68D51 928 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 KCNV1Q6PIU1 500 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 ZPBP2Q6X784 338 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.32□□□□□ -0.76
NPHP3-209ENST00000493732 MCOLN2Q8IZK6 566 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.32□□□□□ -0.76
NPHP3-209ENST00000493732 ATP8B4Q8TF62 1192 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 PPM1EQ8WY54 764 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 KRT35Q92764 455 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 TATDN2Q93075 761 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 PGM2Q96G03 612 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 WNK4Q96J92 1243 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 TRIM51Q9BSJ1 452 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 PAGR1Q9BTK6 254 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 TMEM109Q9BVC6 243 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 IMPG2Q9BZV3 1241 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 CENPHQ9H3R5 247 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 SCAF8Q9UPN6 1271 aaKnown RBP10.32□□□□□ -0.76
NPHP3-209ENST00000493732 BCS1LQ9Y276 419 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 ATP8A1Q9Y2Q0 1164 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 NR2E1Q9Y466 385 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 ADGRA3Q8IWK6 1321 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 RLFQ13129 1914 aa10.32□□□□□ -0.76
NPHP3-209ENST00000493732 A0A087WUV0 522 aaPredicted RBP10.31□□□□□ -0.76
NPHP3-209ENST00000493732 HLA-DRAP01903 254 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 C4BPAP04003 597 aaKnown RBP10.31□□□□□ -0.76
NPHP3-209ENST00000493732 PYGMP11217 842 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 COPB2P35606 906 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 ATP1A2P50993 1020 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 PLTPP55058 493 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 CENPCQ03188 943 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 ADCY2Q08462 1091 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 PTGISQ16647 500 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 C6orf118Q5T5N4 469 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 CEP128Q6ZU80 1094 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 DEFB132Q7Z7B7 95 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 GLG1Q92896 1179 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 MSTO1Q9BUK6 570 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 TRIM31Q9BZY9 425 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 ERVK-5Q9HDB9 667 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 RBAKQ9NYW8 714 aaPredicted RBP10.31□□□□□ -0.76
NPHP3-209ENST00000493732 RGS17Q9UGC6 210 aaPredicted RBP10.31□□□□□ -0.76
NPHP3-209ENST00000493732 ANAPC7Q9UJX3 599 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 BRCA1P38398 1863 aaKnown RBP10.31□□□□□ -0.76
NPHP3-209ENST00000493732 LRRIQ4A6NIV6 560 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 KIAA0754O94854 1291 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 FAM107AO95990 144 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 GAS8O95995 478 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 CYP1A1P04798 512 aaPredicted RBP10.31□□□□□ -0.76
NPHP3-209ENST00000493732 RARGP13631 454 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 ITIH2P19823 946 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 SP4Q02446 784 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 SLC20A2Q08357 652 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 CUL2Q13617 745 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 TRMT10CQ7L0Y3 403 aaKnown RBP10.31□□□□□ -0.76
NPHP3-209ENST00000493732 TAS1R3Q7RTX0 852 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 ADAT2Q7Z6V5 191 aaKnown RBP10.31□□□□□ -0.76
NPHP3-209ENST00000493732 YTHDF3Q7Z739 585 aaKnown RBP10.31□□□□□ -0.76
NPHP3-209ENST00000493732 CCDC125Q86Z20 511 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 RIOX2Q8IUF8 465 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 BBOF1Q8ND07 529 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 TCP11Q8WWU5 503 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 C18orf8Q96DM3 657 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 CGRRF1Q99675 332 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 JPH2Q9BR39 696 aaPredicted RBP10.31□□□□□ -0.76
NPHP3-209ENST00000493732 ROPN1BQ9BZX4 212 aaPredicted RBP10.31□□□□□ -0.76
NPHP3-209ENST00000493732 ROPN1Q9HAT0 212 aaPredicted RBP10.31□□□□□ -0.76
NPHP3-209ENST00000493732 TOPORSQ9NS56 1045 aaPredicted RBP10.31□□□□□ -0.76
NPHP3-209ENST00000493732 WHRNQ9P202 907 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 CNTN6Q9UQ52 1028 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 SNX24Q9Y343 169 aa10.31□□□□□ -0.76
NPHP3-209ENST00000493732 COL11A1P12107 1806 aaPredicted RBP10.31□□□□□ -0.76
NPHP3-209ENST00000493732 WDR81Q562E7 1941 aa10.3□□□□□ -0.76
NPHP3-209ENST00000493732 KIAA1217Q5T5P2 1943 aa10.3□□□□□ -0.76
NPHP3-209ENST00000493732 A0A0B4J269 797 aa10.3□□□□□ -0.76
NPHP3-209ENST00000493732 NDC80O14777 642 aa10.3□□□□□ -0.76
NPHP3-209ENST00000493732 PSTPIP1O43586 416 aa10.3□□□□□ -0.76
NPHP3-209ENST00000493732 PAEPP09466 180 aa10.3□□□□□ -0.76
NPHP3-209ENST00000493732 GLRA2P23416 452 aa10.3□□□□□ -0.76
NPHP3-209ENST00000493732 HPDP32754 393 aaPredicted RBP10.3□□□□□ -0.76
NPHP3-209ENST00000493732 ALDH5A1P51649 535 aaPredicted RBP10.3□□□□□ -0.76
NPHP3-209ENST00000493732 LMNB2Q03252 620 aa10.3□□□□□ -0.76
NPHP3-209ENST00000493732 C1QBPQ07021 282 aaKnown RBP10.3□□□□□ -0.76
NPHP3-209ENST00000493732 PPP1R7Q15435 360 aa10.3□□□□□ -0.76
NPHP3-209ENST00000493732 SGO2Q562F6 1265 aa10.3□□□□□ -0.76
NPHP3-209ENST00000493732 FOXR1Q6PIV2 292 aa10.3□□□□□ -0.76
NPHP3-209ENST00000493732 LBX2Q6XYB7 198 aa10.3□□□□□ -0.76
NPHP3-209ENST00000493732 ABRAQ8N0Z2 381 aa10.3□□□□□ -0.76
NPHP3-209ENST00000493732 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.3□□□□□ -0.76
NPHP3-209ENST00000493732 BBXQ8WY36 941 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms