RNA–Protein interactions for RNA: ENST00000493212.1

PHTF1-212, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 956 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-212ENST00000493212 CDT1Q9H211 546 aa22.75■■□□□ 1.23
PHTF1-212ENST00000493212 TMEM134Q9H6X4 195 aa22.75■■□□□ 1.23
PHTF1-212ENST00000493212 GOLGA2P5Q9HBQ8 144 aa22.75■■□□□ 1.23
PHTF1-212ENST00000493212 SH2B1Q9NRF2 756 aaPredicted RBP22.75■■□□□ 1.23
PHTF1-212ENST00000493212 ARHGAP28Q9P2N2 729 aa22.75■■□□□ 1.23
PHTF1-212ENST00000493212 NOL7Q9UMY1 257 aaKnown RBP22.75■■□□□ 1.23
PHTF1-212ENST00000493212 PCDHB6Q9Y5E3 794 aa22.75■■□□□ 1.23
PHTF1-212ENST00000493212 BACE2Q9Y5Z0 518 aa22.75■■□□□ 1.23
PHTF1-212ENST00000493212 STK24Q9Y6E0 443 aa22.75■■□□□ 1.23
PHTF1-212ENST00000493212 ABLIM1O14639 778 aa22.74■■□□□ 1.23
PHTF1-212ENST00000493212 XYLBO75191 536 aa22.74■■□□□ 1.23
PHTF1-212ENST00000493212 TKTP29401 623 aaKnown RBP22.74■■□□□ 1.23
PHTF1-212ENST00000493212 SOX4Q06945 474 aaPredicted RBP22.74■■□□□ 1.23
PHTF1-212ENST00000493212 MAPK7Q13164 816 aa22.74■■□□□ 1.23
PHTF1-212ENST00000493212 IL17AQ16552 155 aa22.74■■□□□ 1.23
PHTF1-212ENST00000493212 ITFG1Q8TB96 612 aa22.74■■□□□ 1.23
PHTF1-212ENST00000493212 DDX27Q96GQ7 796 aaKnown RBP22.74■■□□□ 1.23
PHTF1-212ENST00000493212 CDY1Q9Y6F8 540 aa22.74■■□□□ 1.23
PHTF1-212ENST00000493212 MYH15Q9Y2K3 1946 aa22.74■■□□□ 1.23
PHTF1-212ENST00000493212 SPTBN4Q9H254 2564 aa22.74■■□□□ 1.23
PHTF1-212ENST00000493212 GVINP1Q7Z2Y8 2422 aa22.73■■□□□ 1.23
PHTF1-212ENST00000493212 E9PMD0 336 aa22.73■■□□□ 1.23
PHTF1-212ENST00000493212 STK25O00506 426 aa22.73■■□□□ 1.23
PHTF1-212ENST00000493212 PROZP22891 400 aa22.73■■□□□ 1.23
PHTF1-212ENST00000493212 PEX3P56589 373 aa22.73■■□□□ 1.23
PHTF1-212ENST00000493212 STARD6P59095 220 aa22.73■■□□□ 1.23
PHTF1-212ENST00000493212 GPC5P78333 572 aa22.73■■□□□ 1.23
PHTF1-212ENST00000493212 APBB1IPQ7Z5R6 666 aaPredicted RBP22.73■■□□□ 1.23
PHTF1-212ENST00000493212 FAM184AQ8NB25 1140 aa22.73■■□□□ 1.23
PHTF1-212ENST00000493212 MMTAG2Q9BU76 263 aaKnown RBP22.73■■□□□ 1.23
PHTF1-212ENST00000493212 HCFC1R1Q9NWW0 138 aa22.73■■□□□ 1.23
PHTF1-212ENST00000493212 DNMT3BQ9UBC3 853 aaKnown RBP22.73■■□□□ 1.23
PHTF1-212ENST00000493212 PP2D1A8MPX8 630 aa22.72■■□□□ 1.23
PHTF1-212ENST00000493212 HIP1RO75146 1068 aa22.72■■□□□ 1.23
PHTF1-212ENST00000493212 BRCC3P46736 316 aa22.72■■□□□ 1.23
PHTF1-212ENST00000493212 GNL2Q13823 731 aaKnown RBP22.72■■□□□ 1.23
PHTF1-212ENST00000493212 ANKS3Q6ZW76 656 aa22.72■■□□□ 1.23
PHTF1-212ENST00000493212 C1orf186Q6ZWK4 172 aa22.72■■□□□ 1.23
PHTF1-212ENST00000493212 KCNK18Q7Z418 384 aa22.72■■□□□ 1.23
PHTF1-212ENST00000493212 SNX27Q96L92 541 aa22.72■■□□□ 1.23
PHTF1-212ENST00000493212 ZMAT2Q96NC0 199 aaKnown RBP22.72■■□□□ 1.23
PHTF1-212ENST00000493212 RUSC1Q9BVN2 902 aa22.72■■□□□ 1.23
PHTF1-212ENST00000493212 RAB34Q9BZG1 259 aa22.72■■□□□ 1.23
PHTF1-212ENST00000493212 KCNH3Q9ULD8 1083 aa22.72■■□□□ 1.23
PHTF1-212ENST00000493212 SIT1Q9Y3P8 196 aa22.72■■□□□ 1.23
PHTF1-212ENST00000493212 WDR87Q6ZQQ6 2873 aa22.72■■□□□ 1.23
PHTF1-212ENST00000493212 CCDC169A6NNP5 214 aa22.71■■□□□ 1.23
PHTF1-212ENST00000493212 I3L4J1 428 aa22.71■■□□□ 1.23
PHTF1-212ENST00000493212 LAD1O00515 517 aa22.71■■□□□ 1.23
PHTF1-212ENST00000493212 MEFVO15553 781 aaPredicted RBP22.71■■□□□ 1.23
PHTF1-212ENST00000493212 TRAPPC3O43617 180 aa22.71■■□□□ 1.23
PHTF1-212ENST00000493212 TBC1D4O60343 1298 aa22.71■■□□□ 1.23
PHTF1-212ENST00000493212 DCNP07585 359 aaKnown RBP22.71■■□□□ 1.23
PHTF1-212ENST00000493212 PRPHP41219 470 aa22.71■■□□□ 1.23
PHTF1-212ENST00000493212 ZNF568Q3ZCX4 644 aa22.71■■□□□ 1.23
PHTF1-212ENST00000493212 SLC8B1Q6J4K2 584 aa22.71■■□□□ 1.23
PHTF1-212ENST00000493212 RINT1Q6NUQ1 792 aa22.71■■□□□ 1.23
PHTF1-212ENST00000493212 MTSS1LQ765P7 747 aa22.71■■□□□ 1.23
PHTF1-212ENST00000493212 NPAS3Q8IXF0 933 aa22.71■■□□□ 1.23
PHTF1-212ENST00000493212 PJA1Q8NG27 643 aa22.71■■□□□ 1.23
PHTF1-212ENST00000493212 DDX23Q9BUQ8 820 aaKnown RBP22.71■■□□□ 1.23
PHTF1-212ENST00000493212 CCDC94Q9BW85 323 aaPredicted RBP22.71■■□□□ 1.23
PHTF1-212ENST00000493212 TARS2Q9BW92 718 aaKnown RBP22.71■■□□□ 1.23
PHTF1-212ENST00000493212 MRPL4Q9BYD3 311 aaKnown RBP22.71■■□□□ 1.23
PHTF1-212ENST00000493212 TOPORSQ9NS56 1045 aaPredicted RBP22.71■■□□□ 1.23
PHTF1-212ENST00000493212 POLIQ9UNA4 740 aa22.71■■□□□ 1.23
PHTF1-212ENST00000493212 DNM3Q9UQ16 869 aa22.71■■□□□ 1.23
PHTF1-212ENST00000493212 DCHS1Q96JQ0 3298 aa22.71■■□□□ 1.23
PHTF1-212ENST00000493212 ZNF292O60281 2723 aa22.7■■□□□ 1.22
PHTF1-212ENST00000493212 GLULP15104 373 aa22.7■■□□□ 1.22
PHTF1-212ENST00000493212 KCNE1P15382 129 aa22.7■■□□□ 1.22
PHTF1-212ENST00000493212 RFX1P22670 979 aa22.7■■□□□ 1.22
PHTF1-212ENST00000493212 CDC25AP30304 524 aa22.7■■□□□ 1.22
PHTF1-212ENST00000493212 DMP1Q13316 513 aaPredicted RBP22.7■■□□□ 1.22
PHTF1-212ENST00000493212 PABPC1LQ4VXU2 614 aaKnown RBP22.7■■□□□ 1.22
PHTF1-212ENST00000493212 ADSSL1Q8N142 457 aa22.7■■□□□ 1.22
PHTF1-212ENST00000493212 DRC1Q96MC2 740 aa22.7■■□□□ 1.22
PHTF1-212ENST00000493212 NTPCRQ9BSD7 190 aaKnown RBP22.7■■□□□ 1.22
PHTF1-212ENST00000493212 C17orf75Q9HAS0 396 aa22.7■■□□□ 1.22
PHTF1-212ENST00000493212 AVENQ9NQS1 362 aaPredicted RBP22.7■■□□□ 1.22
PHTF1-212ENST00000493212 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.7■■□□□ 1.22
PHTF1-212ENST00000493212 SLC38A7Q9NVC3 462 aa22.7■■□□□ 1.22
PHTF1-212ENST00000493212 RBM19Q9Y4C8 960 aaKnown RBP22.7■■□□□ 1.22
PHTF1-212ENST00000493212 COL4A3Q01955 1670 aa22.7■■□□□ 1.22
PHTF1-212ENST00000493212 ABLIM3O94929 683 aa22.69■■□□□ 1.22
PHTF1-212ENST00000493212 MCF2P10911 925 aa22.69■■□□□ 1.22
PHTF1-212ENST00000493212 YARSP54577 528 aaKnown RBP22.69■■□□□ 1.22
PHTF1-212ENST00000493212 OSTNP61366 133 aa22.69■■□□□ 1.22
PHTF1-212ENST00000493212 KRT79Q5XKE5 535 aa22.69■■□□□ 1.22
PHTF1-212ENST00000493212 POTEHQ6S545 545 aa22.69■■□□□ 1.22
PHTF1-212ENST00000493212 ZNF461Q8TAF7 563 aa22.69■■□□□ 1.22
PHTF1-212ENST00000493212 FOXQ1Q9C009 403 aa22.69■■□□□ 1.22
PHTF1-212ENST00000493212 SEMA4AQ9H3S1 761 aa22.69■■□□□ 1.22
PHTF1-212ENST00000493212 KMT5AQ9NQR1 393 aa22.69■■□□□ 1.22
PHTF1-212ENST00000493212 CNTN3Q9P232 1028 aa22.69■■□□□ 1.22
PHTF1-212ENST00000493212 ARHGEF37A1IGU5 675 aa22.68■■□□□ 1.22
PHTF1-212ENST00000493212 PODXLO00592 558 aa22.68■■□□□ 1.22
PHTF1-212ENST00000493212 GUCY2CP25092 1073 aa22.68■■□□□ 1.22
PHTF1-212ENST00000493212 ROR1Q01973 937 aa22.68■■□□□ 1.22
PHTF1-212ENST00000493212 MRPL58Q14197 206 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms