RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 PABPC5Q96DU9 382 aaKnown RBP14.6□□□□□ -0.07
MSH6-208ENST00000493177 SAAL1Q96ER3 474 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 CCDC51Q96ER9 411 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 FAM193BQ96PV7 902 aaPredicted RBP14.6□□□□□ -0.07
MSH6-208ENST00000493177 CWH43Q9H720 699 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 ENTPD7Q9NQZ7 604 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 RNF19AQ9NV58 838 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 MAGEC2Q9UBF1 373 aaPredicted RBP14.6□□□□□ -0.07
MSH6-208ENST00000493177 AGO2Q9UKV8 859 aaKnown RBP14.6□□□□□ -0.07
MSH6-208ENST00000493177 FRMD4BQ9Y2L6 1034 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 PCDHB2Q9Y5E7 798 aa14.6□□□□□ -0.07
MSH6-208ENST00000493177 CHD9Q3L8U1 2897 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 A0A1B0GUA9 196 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 H3BQ06 376 aaPredicted RBP14.59□□□□□ -0.07
MSH6-208ENST00000493177 TNFRSF10AO00220 468 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 KIAA0391O15091 583 aaKnown RBP14.59□□□□□ -0.07
MSH6-208ENST00000493177 ZC3H11AO75152 810 aaKnown RBP eCLIP14.59□□□□□ -0.07
MSH6-208ENST00000493177 MCF2P10911 925 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 EPB41P11171 864 aaKnown RBP14.59□□□□□ -0.07
MSH6-208ENST00000493177 CDK11BP21127 795 aaKnown RBP14.59□□□□□ -0.07
MSH6-208ENST00000493177 PROZP22891 400 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 HOXA11P31270 313 aaPredicted RBP14.59□□□□□ -0.07
MSH6-208ENST00000493177 NDUFV1P49821 464 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 MCL1Q07820 350 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 MYBPC2Q14324 1141 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 BMS1Q14692 1282 aaKnown RBP14.59□□□□□ -0.07
MSH6-208ENST00000493177 NFIL3Q16649 462 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 CCDC40Q4G0X9 1142 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 HSP90AA4PQ58FG1 418 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 PLPP4Q5VZY2 271 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 SLC27A1Q6PCB7 646 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 FOXR2Q6PJQ5 311 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 ZNF598Q86UK7 904 aaKnown RBP14.59□□□□□ -0.07
MSH6-208ENST00000493177 SLC9A9Q8IVB4 645 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 C12orf56Q8IXR9 622 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 HACE1Q8IYU2 909 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 GPD1LQ8N335 351 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 RDH13Q8NBN7 331 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 RSPH1Q8WYR4 309 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 CEP63Q96MT8 703 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 FAM213AQ9BRX8 229 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 TRAIPQ9BWF2 469 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 APOL6Q9BWW8 343 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 HAPLN2Q9GZV7 340 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 RBSNQ9H1K0 784 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 CDT1Q9H211 546 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 RSAD1Q9HA92 442 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 PTPRHQ9HD43 1115 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 SAMSN1Q9NSI8 373 aaKnown RBP14.59□□□□□ -0.07
MSH6-208ENST00000493177 FANCLQ9NW38 375 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 FAM50BQ9Y247 325 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 STYXL1Q9Y6J8 313 aa14.59□□□□□ -0.07
MSH6-208ENST00000493177 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.58□□□□□ -0.08
MSH6-208ENST00000493177 A0A0B4J269 797 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 EXTL3O43909 919 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 LDHAP00338 332 aaKnown RBP14.58□□□□□ -0.08
MSH6-208ENST00000493177 BMP1P13497 986 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 ITGA4P13612 1032 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 ATF7P17544 494 aaPredicted RBP14.58□□□□□ -0.08
MSH6-208ENST00000493177 DNAJB1P25685 340 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 IRS1P35568 1242 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 PSMC2P35998 433 aaKnown RBP14.58□□□□□ -0.08
MSH6-208ENST00000493177 PBX3P40426 434 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 NRIP1P48552 1158 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 OSTNP61366 133 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 HYAL1Q12794 435 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 HSP90AA2PQ14568 343 aaPredicted RBP14.58□□□□□ -0.08
MSH6-208ENST00000493177 NCAPHQ15003 741 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 CLUL1Q15846 466 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 PUS10Q3MIT2 529 aaKnown RBP14.58□□□□□ -0.08
MSH6-208ENST00000493177 LEXMQ3ZCV2 418 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 SEZ6Q53EL9 994 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 NOMO2Q5JPE7 1267 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 PTCRAQ6ISU1 281 aaPredicted RBP14.58□□□□□ -0.08
MSH6-208ENST00000493177 LRRC55Q6ZSA7 311 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 FAM114A1Q8IWE2 563 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 FAM186BQ8IYM0 893 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 TMEM169Q96HH4 297 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 EIF2AQ9BY44 585 aaKnown RBP14.58□□□□□ -0.08
MSH6-208ENST00000493177 THAP9Q9H5L6 903 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 TLE6Q9H808 572 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 DMAC2Q9NW81 257 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 SPG21Q9NZD8 308 aa14.58□□□□□ -0.08
MSH6-208ENST00000493177 CHD7Q9P2D1 2997 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 CARNS1A5YM72 827 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 NT5C1B-RDH14C9J2C7 533 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 ABLIM1O14639 778 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 OGTO15294 1046 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 SLC16A3O15427 465 aaKnown RBP14.57□□□□□ -0.08
MSH6-208ENST00000493177 GNA14O95837 355 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 SRGAP2BP0DMP2 458 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 CASP4P49662 377 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 ACOT2P49753 483 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 BCAR1P56945 870 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 PDE12Q6L8Q7 609 aaKnown RBP14.57□□□□□ -0.08
MSH6-208ENST00000493177 TMC7Q7Z402 723 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 FILIP1Q7Z7B0 1213 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 ADGRD2Q7Z7M1 963 aa14.57□□□□□ -0.08
MSH6-208ENST00000493177 ZC3H3Q8IXZ2 948 aaKnown RBP14.57□□□□□ -0.08
MSH6-208ENST00000493177 ZSWIM2Q8NEG5 633 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms