RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 NFX1Q12986 1120 aaKnown RBP15.21■□□□□ 0.03
PDZRN3-210ENST00000492909 BIRC3Q13489 604 aa15.21■□□□□ 0.03
PDZRN3-210ENST00000492909 TDRD10Q5VZ19 366 aaKnown RBP15.21■□□□□ 0.03
PDZRN3-210ENST00000492909 FAM126BQ8IXS8 530 aa15.21■□□□□ 0.03
PDZRN3-210ENST00000492909 USP38Q8NB14 1042 aa15.21■□□□□ 0.03
PDZRN3-210ENST00000492909 CAGE1Q8TC20 777 aa15.21■□□□□ 0.03
PDZRN3-210ENST00000492909 BAP1Q92560 729 aa15.21■□□□□ 0.03
PDZRN3-210ENST00000492909 NAA15Q9BXJ9 866 aaKnown RBP15.21■□□□□ 0.03
PDZRN3-210ENST00000492909 NUCKS1Q9H1E3 243 aaKnown RBP15.21■□□□□ 0.03
PDZRN3-210ENST00000492909 ASB7Q9H672 318 aa15.21■□□□□ 0.03
PDZRN3-210ENST00000492909 CHST12Q9NRB3 414 aa15.21■□□□□ 0.03
PDZRN3-210ENST00000492909 APEX2Q9UBZ4 518 aa15.21■□□□□ 0.03
PDZRN3-210ENST00000492909 DAAM1Q9Y4D1 1078 aa15.21■□□□□ 0.03
PDZRN3-210ENST00000492909 SQORQ9Y6N5 450 aa15.21■□□□□ 0.03
PDZRN3-210ENST00000492909 MROH7Q68CQ1 1323 aa15.21■□□□□ 0.03
PDZRN3-210ENST00000492909 GHRP10912 638 aa15.21■□□□□ 0.02
PDZRN3-210ENST00000492909 SLC10A6Q3KNW5 377 aa15.21■□□□□ 0.02
PDZRN3-210ENST00000492909 TWF2Q6IBS0 349 aaKnown RBP15.21■□□□□ 0.02
PDZRN3-210ENST00000492909 RRAGAQ7L523 313 aa15.21■□□□□ 0.02
PDZRN3-210ENST00000492909 TMEM139Q8IV31 216 aa15.21■□□□□ 0.02
PDZRN3-210ENST00000492909 TAS1R2Q8TE23 839 aa15.21■□□□□ 0.02
PDZRN3-210ENST00000492909 AGO3Q9H9G7 860 aaKnown RBP15.21■□□□□ 0.02
PDZRN3-210ENST00000492909 ZNHIT6Q9NWK9 470 aaKnown RBP15.21■□□□□ 0.02
PDZRN3-210ENST00000492909 RAB20Q9NX57 234 aa15.21■□□□□ 0.02
PDZRN3-210ENST00000492909 FHOD1Q9Y613 1164 aa15.21■□□□□ 0.02
PDZRN3-210ENST00000492909 LRRC53A6NM62 1247 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 LACTBL1A8MY62 500 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 TMEM191BP0C7N4 346 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 RFX1P22670 979 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 YARSP54577 528 aaKnown RBP15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 PAK2Q13177 524 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 LPIN1Q14693 890 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 DUOXA2Q1HG44 320 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 UBXN11Q5T124 520 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 CD302Q8IX05 232 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 PDCL2Q8N4E4 241 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 OR5B17Q8NGF7 314 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 SEMA4DQ92854 862 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 FAM84AQ96KN4 292 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 SPAG5Q96R06 1193 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 ERVK-5Q9HDB9 667 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 SNTG2Q9NY99 539 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 PCDH10Q9P2E7 1040 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 PADI3Q9ULW8 664 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 PLAGL2Q9UPG8 496 aa15.2■□□□□ 0.02
PDZRN3-210ENST00000492909 TLR3O15455 904 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 PHACTR2O75167 634 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 CD4P01730 458 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 FECHP22830 423 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 CD52P31358 61 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 HNRNPH3P31942 346 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 PIK3CAP42336 1068 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 TFAMQ00059 246 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 BFSP2Q13515 415 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 LRRC26Q2I0M4 334 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 PHLDB3Q6NSJ2 640 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 PDXDC1Q6P996 788 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 SLC39A5Q6ZMH5 540 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 EFCAB13Q8IY85 973 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 ANKRD36BP1Q96IX9 119 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 MTMR12Q9C0I1 747 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 NXF3Q9H4D5 531 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 PLEKHA5Q9HAU0 1116 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 TRMT1Q9NXH9 659 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 MYO6Q9UM54 1294 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 PDCD11Q14690 1871 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 MEFVO15553 781 aaPredicted RBP15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 ARHGAP6O43182 974 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 PQBP1O60828 265 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 ZC3H11AO75152 810 aaKnown RBP eCLIP15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 LRRN2O75325 713 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 HLA-DRAP01903 254 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 TNNC2P02585 160 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 ZSCAN20P17040 1043 aaPredicted RBP15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 CAPN2P17655 700 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 RAPGEF1Q13905 1077 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 MEA1Q16626 185 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 E4F1Q66K89 784 aaPredicted RBP15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 JADE1Q6IE81 842 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 IQCEQ6IPM2 695 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 GJB7Q6PEY0 223 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 TRAF7Q6Q0C0 670 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 CYP26C1Q6V0L0 522 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 TMTC1Q8IUR5 882 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 ZNF592Q92610 1267 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 SYN2Q92777 582 aaPredicted RBP15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 OSBPL7Q9BZF2 842 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 DNAJC12Q9UKB3 198 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 HES2Q9Y543 173 aa15.19■□□□□ 0.02
PDZRN3-210ENST00000492909 VNN1O95497 513 aa15.18■□□□□ 0.02
PDZRN3-210ENST00000492909 NFICP08651 508 aa15.18■□□□□ 0.02
PDZRN3-210ENST00000492909 SELPP16109 830 aa15.18■□□□□ 0.02
PDZRN3-210ENST00000492909 WDR44Q5JSH3 913 aa15.18■□□□□ 0.02
PDZRN3-210ENST00000492909 SFMBT2Q5VUG0 894 aa15.18■□□□□ 0.02
PDZRN3-210ENST00000492909 WDR59Q6PJI9 974 aa15.18■□□□□ 0.02
PDZRN3-210ENST00000492909 TRAPPC11Q7Z392 1133 aa15.18■□□□□ 0.02
PDZRN3-210ENST00000492909 ANKRD33Q7Z3H0 272 aa15.18■□□□□ 0.02
PDZRN3-210ENST00000492909 NT5DC4Q86YG4 428 aa15.18■□□□□ 0.02
PDZRN3-210ENST00000492909 SNX27Q96L92 541 aa15.18■□□□□ 0.02
PDZRN3-210ENST00000492909 NT5C1BQ96P26 610 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms