RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 TRIM71Q2Q1W2 868 aaKnown RBP4.53□□□□□ -1.68
BRCA1-220ENST00000492859 SKOR2Q2VWA4 1001 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-220ENST00000492859 SEZ6Q53EL9 994 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 CYP4A22Q5TCH4 519 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 GGT6Q6P531 493 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 TMC6Q7Z403 805 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 SIAH1Q8IUQ4 282 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 CPOQ8IVL8 374 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 LSMEM2Q8N112 164 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 TMEM102Q8N9M5 508 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-220ENST00000492859 KCTD6Q8NC69 237 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 C1orf162Q8NEQ5 155 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-220ENST00000492859 OR8K3Q8NH51 312 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 CREB3L4Q8TEY5 395 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 SLC5A11Q8WWX8 675 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 PIBF1Q8WXW3 757 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 RFFLQ8WZ73 363 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 EDEM1Q92611 657 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 RUBCNQ92622 972 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 HPS1Q92902 700 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 CCDC74AQ96AQ1 378 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 ZNF775Q96BV0 537 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-220ENST00000492859 PPP1R14BQ96C90 147 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 NSUN4Q96CB9 384 aaKnown RBP4.53□□□□□ -1.68
BRCA1-220ENST00000492859 MAELQ96JY0 434 aaKnown RBP4.53□□□□□ -1.68
BRCA1-220ENST00000492859 TRIM47Q96LD4 638 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 C7orf26Q96N11 449 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 OCSTAMPQ9BR26 566 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 THUMPD2Q9BTF0 503 aaKnown RBP4.53□□□□□ -1.68
BRCA1-220ENST00000492859 SORBS1Q9BX66 1292 aaKnown RBP4.53□□□□□ -1.68
BRCA1-220ENST00000492859 INTS2Q9H0H0 1204 aaKnown RBP4.53□□□□□ -1.68
BRCA1-220ENST00000492859 FAM204AQ9H8W3 233 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 GORASP2Q9H8Y8 452 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 FANCEQ9HB96 536 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 DMRT3Q9NQL9 472 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 SERINC1Q9NRX5 453 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 TRPM5Q9NZQ8 1165 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 HMG20BQ9P0W2 317 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 MAP10Q9P2G4 905 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 AMACRQ9UHK6 382 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 CNOT6Q9ULM6 557 aaKnown RBP4.53□□□□□ -1.68
BRCA1-220ENST00000492859 ZMYND8Q9ULU4 1186 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-220ENST00000492859 TLR6Q9Y2C9 796 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 DTNAQ9Y4J8 743 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 CARMIL1Q5VZK9 1371 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 TNIKQ9UKE5 1360 aa4.53□□□□□ -1.68
BRCA1-220ENST00000492859 TTC24A2A3L6 582 aaPredicted RBP4.53□□□□□ -1.69
BRCA1-220ENST00000492859 ACOD1A6NK06 481 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 PRR5-ARHGAP8B1AHC4 643 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 PSMD9O00233 223 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 TEX28O15482 410 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 DAPK3O43293 454 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 PROM1O43490 865 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 MAN1A2O60476 641 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 ACSL4O60488 711 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 TACC1O75410 805 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 FLOT1O75955 427 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 CAMTA2O94983 1202 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 LRG1P02750 347 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 PF4P02776 101 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 ZFYP08048 801 aaPredicted RBP4.53□□□□□ -1.69
BRCA1-220ENST00000492859 CYP3A4P08684 503 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 CCNYL3P0C7X3 344 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 XRCC6P12956 609 aaKnown RBP eCLIP4.53□□□□□ -1.69
BRCA1-220ENST00000492859 CES1P23141 567 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 TLX1P31314 330 aaPredicted RBP4.53□□□□□ -1.69
BRCA1-220ENST00000492859 RFC1P35251 1148 aaPredicted RBP4.53□□□□□ -1.69
BRCA1-220ENST00000492859 PPP5CP53041 499 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 RPP38P78345 283 aaKnown RBP4.53□□□□□ -1.69
BRCA1-220ENST00000492859 GSTO1P78417 241 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 ARHGAP8P85298 464 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 PRKCZQ05513 592 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 CETN1Q12798 172 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 EFR3AQ14156 821 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 MAP3K11Q16584 847 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 FAM110CQ1W6H9 321 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 AAK1Q2M2I8 961 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 CYP27C1Q4G0S4 372 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 IZUMO3Q5VZ72 239 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 HGSNATQ68CP4 663 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 TAF2Q6P1X5 1199 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 C6orf89Q6UWU4 347 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 LRIG3Q6UXM1 1119 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 ARHGAP36Q6ZRI8 547 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 NANOGNBQ7Z5D8 188 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 MTDHQ86UE4 582 aaKnown RBP4.53□□□□□ -1.69
BRCA1-220ENST00000492859 LSRQ86X29 649 aaPredicted RBP4.53□□□□□ -1.69
BRCA1-220ENST00000492859 CDH26Q8IXH8 852 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 ARL14Q8N4G2 192 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 EFHBQ8N7U6 833 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 ZNF565Q8N9K5 539 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 MFSD2AQ8NA29 543 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 GOLM1Q8NBJ4 401 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 PPP1R35Q8TAP8 253 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 ETNPPLQ8TBG4 499 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 BCAS4Q8TDM0 211 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 ADAMTS15Q8TE58 950 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 PIGOQ8TEQ8 1089 aa4.53□□□□□ -1.69
BRCA1-220ENST00000492859 FRAT1Q92837 279 aaPredicted RBP4.53□□□□□ -1.69
BRCA1-220ENST00000492859 TMIGD2Q96BF3 282 aa4.53□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms