RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	GFPT1	Q06210	699 aa	Predicted RBP	6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	DSC1	Q08554	894 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	GRSF1	Q12849	480 aa	Known RBP eCLIP	6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	ITGB3BP	Q13352	177 aa	Predicted RBP	6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	ALX1	Q15699	326 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	C20orf194	Q5TEA3	1177 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	PDZD4	Q76G19	769 aa	Predicted RBP	6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	CATSPER4	Q7RTX7	472 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	MRPL10	Q7Z7H8	261 aa	Known RBP	6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	SYT12	Q8IV01	421 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	LINC01465	Q8N7H1	131 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	PDCD7	Q8N8D1	485 aa	Known RBP	6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	SPRYD3	Q8NCJ5	442 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	LNX1	Q8TBB1	728 aa	Predicted RBP	6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	PIBF1	Q8WXW3	757 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	ZFYVE19	Q96K21	471 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	FDXACB1	Q9BRP7	624 aa	Predicted RBP	6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	TTPAL	Q9BTX7	342 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	SNTG2	Q9NY99	539 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	ZBTB47	Q9UFB7	747 aa	Predicted RBP	6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	EBF1	Q9UH73	591 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	MAD2L2	Q9UI95	211 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	SLC6A14	Q9UN76	642 aa		6.06	□□□□□ -1.44
SEC13-219	ENST00000492602	NEDD4	P46934	1319 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	C2CD3	Q4AC94	2353 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	COL5A1	P20908	1838 aa	Predicted RBP	6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	PIK3CD	O00329	1044 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	TNFRSF10B	O14763	440 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	MAF	O75444	373 aa	Predicted RBP	6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	MICAL2	O94851	1124 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	CCNE2	O96020	404 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	PC	P11498	1178 aa	Known RBP	6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	ITGA4	P13612	1032 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	GJA1	P17302	382 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	ADSS	P30520	456 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	MLH1	P40692	756 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	CCR2	P41597	374 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	PTGER3	P43115	390 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	SCNN1G	P51170	649 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	FCHO2	Q0JRZ9	810 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	CAMK2B	Q13554	666 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	DMC1	Q14565	340 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	SLC35G1	Q2M3R5	365 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	CYP4A22	Q5TCH4	519 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	FAM171A1	Q5VUB5	890 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	FSTL4	Q6MZW2	842 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	MIS18BP1	Q6P0N0	1132 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	RTL10	Q7L3V2	364 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	LPCAT2	Q7L5N7	544 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	HAUS6	Q7Z4H7	955 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	TBC1D10C	Q8IV04	446 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	GPIHBP1	Q8IV16	184 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	NAXD	Q8IW45	347 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	GALNT15	Q8N3T1	639 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	ENAH	Q8N8S7	591 aa	Predicted RBP	6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	HASPIN	Q8TF76	798 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	E2F7	Q96AV8	911 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	RSPRY1	Q96DX4	576 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	WBP1	Q96G27	269 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	GPATCH3	Q96I76	525 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	GAD1	Q99259	594 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	INO80B	Q9C086	356 aa	Predicted RBP	6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	RNF41	Q9H4P4	317 aa	Predicted RBP	6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	SLITRK6	Q9H5Y7	841 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	RIOX1	Q9H6W3	641 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	UBN1	Q9NPG3	1134 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	MIOS	Q9NXC5	875 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	KIAA1522	Q9P206	1035 aa	Predicted RBP	6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	CIZ1	Q9ULV3	898 aa	Predicted RBP	6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	THADA	Q6YHU6	1953 aa		6.05	□□□□□ -1.44
SEC13-219	ENST00000492602	SF3B1	O75533	1304 aa	Known RBP eCLIP	6.04	□□□□□ -1.44	4e-7	■■■■■ 40.1
SEC13-219	ENST00000492602	ARL5C	A6NH57	179 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	SPDYE3	A6NKU9	549 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	GOLGA8CP	A6NN73	597 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	TLX3	O43711	291 aa	Predicted RBP	6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	CYTH3	O43739	400 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	EGF	P01133	1207 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	HLA-E	P13747	358 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	RHD	Q02161	417 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	SEMG2	Q02383	582 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	TNK2	Q07912	1038 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	SPIRE1	Q08AE8	756 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	SLC14A1	Q13336	389 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	DRP2	Q13474	957 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	RAB33A	Q14088	237 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	DUOXA1	Q1HG43	343 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	C2orf27A	Q580R0	203 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	TMEM196	Q5HYL7	178 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	LYSMD4	Q5XG99	296 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	ZNF574	Q6ZN55	896 aa	Predicted RBP	6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	SYT13	Q7L8C5	426 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	TSTD1	Q8NFU3	115 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	RPLP0P6	Q8NHW5	317 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	BAP1	Q92560	729 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	ZFP42	Q96MM3	310 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	MXRA8	Q9BRK3	442 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	TRPV4	Q9HBA0	871 aa		6.04	□□□□□ -1.44
SEC13-219	ENST00000492602	LY9	Q9HBG7	655 aa		6.04	□□□□□ -1.44

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