RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 GPR156Q8NFN8 814 aa3.82□□□□□ -1.8
HMGB1P30-201ENST00000492455 ATXN2LQ8WWM7 1075 aaKnown RBP3.82□□□□□ -1.8
HMGB1P30-201ENST00000492455 GFM2Q969S9 779 aaKnown RBP3.82□□□□□ -1.8
HMGB1P30-201ENST00000492455 RUNDC1Q96C34 613 aa3.82□□□□□ -1.8
HMGB1P30-201ENST00000492455 SLC7A6OSQ96CW6 309 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P30-201ENST00000492455 C8orf48Q96LL4 319 aa3.82□□□□□ -1.8
HMGB1P30-201ENST00000492455 AIFM3Q96NN9 605 aa3.82□□□□□ -1.8
HMGB1P30-201ENST00000492455 GPHA2Q96T91 129 aa3.82□□□□□ -1.8
HMGB1P30-201ENST00000492455 ENKD1Q9H0I2 346 aa3.82□□□□□ -1.8
HMGB1P30-201ENST00000492455 RBM12Q9NTZ6 932 aaKnown RBP3.82□□□□□ -1.8
HMGB1P30-201ENST00000492455 TRPS1Q9UHF7 1281 aa3.82□□□□□ -1.8
HMGB1P30-201ENST00000492455 INSL6Q9Y581 213 aa3.82□□□□□ -1.8
HMGB1P30-201ENST00000492455 RBM8AQ9Y5S9 174 aaKnown RBP3.82□□□□□ -1.8
HMGB1P30-201ENST00000492455 MTSS1O43312 755 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 MFAP3LO75121 409 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 RECQL4O94761 1208 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 ALDH1A2O94788 518 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 IPO13O94829 963 aaKnown RBP3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 GSPT1P15170 499 aaKnown RBP3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 PDCP20941 246 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 AKAP5P24588 427 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 CYP2C19P33261 490 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 KIR2DL3P43628 341 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 ATP2C1P98194 919 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 DSC2Q02487 901 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 IL10RAQ13651 578 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 MLC1Q15049 377 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 MAN2A1Q16706 1144 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 UAP1L1Q3KQV9 507 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 ATAT1Q5SQI0 421 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 CYB5RLQ6IPT4 315 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 MFSD5Q6N075 450 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 BEND2Q8NDZ0 799 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 GCDHQ92947 438 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 HPS3Q969F9 1004 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 PGBD4Q96DM1 585 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 TAAR9Q96RI9 348 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 DMRTA2Q96SC8 542 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 TCF25Q9BQ70 676 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 SLC6A15Q9H2J7 730 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 SYNPO2LQ9H987 977 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 DNM3Q9UQ16 869 aa3.81□□□□□ -1.8
HMGB1P30-201ENST00000492455 RPTORQ8N122 1335 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 A6NNZ2 444 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 AKR1B10O60218 316 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 PRAMEF4O60810 478 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 C1RP00736 705 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 VSIG10L2P0DP72 767 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 AVPR1BP47901 424 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 BPIFB4P59827 614 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 NOMO1Q15155 1222 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 FKBP15Q5T1M5 1219 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 FBXO42Q6P3S6 717 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 USP45Q70EL2 814 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 WDR75Q8IWA0 830 aaKnown RBP3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 ZGPATQ8N5A5 531 aaKnown RBP3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 MB21D1Q8N884 522 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 SLC35G2Q8TBE7 412 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 SMG7Q92540 1137 aaKnown RBP3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 KAT5Q92993 513 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 LRGUKQ96M69 825 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 UIMC1Q96RL1 719 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 MNTQ99583 582 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 R3HDMLQ9H3Y0 253 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 C14orf93Q9H972 538 aaKnown RBP3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 DDX20Q9UHI6 824 aaKnown RBP3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 INTUQ9ULD6 942 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 PCDHB1Q9Y5F3 818 aa3.8□□□□□ -1.8
HMGB1P30-201ENST00000492455 ATRNL1Q5VV63 1379 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 KLRG2A4D1S0 409 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 VSTM5A8MXK1 200 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 ITGA10O75578 1167 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 AMY1AP04745 511 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 CT47B1P0C2W7 299 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 LAG3P18627 525 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 VCAM1P19320 739 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 ADSLP30566 484 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 GUCY1A2P33402 732 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 SREBF1P36956 1147 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 SLC16A1P53985 500 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 ELLP55199 621 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 WNT3AP56704 352 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 ATP8B2P98198 1209 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 TARDBPQ13148 414 aaKnown RBP eCLIP3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 GTF2H3Q13889 308 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 GAGE13Q4V321 117 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 IFIT1BQ5T764 474 aaKnown RBP3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 TRMT2AQ8IZ69 625 aaKnown RBP3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 MIER2Q8N344 545 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 ANKRD53Q8N9V6 530 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 REPS2Q8NFH8 660 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 CPT1CQ8TCG5 803 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 NSUN6Q8TEA1 469 aaKnown RBP3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 DIS3LQ8TF46 1054 aaKnown RBP3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 ZNF480Q8WV37 535 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 RAB24Q969Q5 203 aa3.79□□□□□ -1.8
HMGB1P30-201ENST00000492455 ARL8AQ96BM9 186 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms