RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 AGXT2Q9BYV1 514 aa13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 SLC32A1Q9H598 525 aa13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 SH3GLB2Q9NR46 395 aa13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 PRG3Q9Y2Y8 225 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-228ENST00000492150 F8W810 466 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 M0R2N6 131 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 CDX4O14627 284 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 HNRNPA1P09651 372 aaKnown RBP eCLIP13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 SPATA31D3P0C874 917 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 SRGAP2CP0DJJ0 459 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 GLUD2P49448 558 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 MLLT6P55198 1093 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 NLRP5P59047 1200 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 DSG1Q02413 1049 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 DSC1Q08554 894 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 LAMTOR4Q0VGL1 99 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 LRRC32Q14392 662 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 C1orf228Q6PIY5 440 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 SPATA31D4Q6ZUB0 917 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 NPAS3Q8IXF0 933 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 TMEM143Q96AN5 459 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 JAKMIP1Q96N16 626 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 RNF39Q9H2S5 420 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 CLMPQ9H6B4 373 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 DHX33Q9H6R0 707 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 NCOA5Q9HCD5 579 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 MIOSQ9NXC5 875 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 WRAP73Q9P2S5 460 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 KCNH3Q9ULD8 1083 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 PCDHA4Q9UN74 947 aa13.04□□□□□ -0.32
CACNA1C-228ENST00000492150 PLXNB3Q9ULL4 1909 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 PIEZO2Q9H5I5 2752 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 ARL5CA6NH57 179 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 POU2F2P09086 479 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 ITGA4P13612 1032 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 PDIA3P30101 505 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 HOXA9P31269 272 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 OR1G1P47890 313 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 NPY5RQ15761 445 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 MOXD1Q6UVY6 613 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 RAB44Q7Z6P3 723 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 ZNF843Q8N446 348 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 ELSPBP1Q96BH3 223 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 MSANTD3Q96H12 275 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 EIF2AQ9BY44 585 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 C22orf23Q9BZE7 217 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 CHST7Q9NS84 486 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 FNIP2Q9P278 1114 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 VAV3Q9UKW4 847 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 IPPQ9Y573 584 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 SNX14Q9Y5W7 946 aa13.03□□□□□ -0.32
CACNA1C-228ENST00000492150 TEP1Q99973 2627 aaKnown RBP13.02□□□□□ -0.32
CACNA1C-228ENST00000492150 CAPN8A6NHC0 703 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 MAP3K13O43283 966 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 SLC37A4O43826 429 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 RPS6KB1P23443 525 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 QARSP47897 775 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 EVCP57679 992 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 CCT2P78371 535 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 BLOC1S2Q6QNY1 142 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 PALB2Q86YC2 1186 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 CNNM3Q8NE01 707 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 ITFG1Q8TB96 612 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 PSPC1Q8WXF1 523 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 SLC7A3Q8WY07 619 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 IRF7Q92985 503 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 CEP170P1Q96L14 293 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 B3GALT6Q96L58 329 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 GAD1Q99259 594 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 PLA2G2FQ9BZM2 168 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 UBN1Q9NPG3 1134 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 GDE1Q9NZC3 331 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 DKK4Q9UBT3 224 aa13.02□□□□□ -0.33
CACNA1C-228ENST00000492150 BCLAF3A2AJT9 711 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 CAVIN2O95810 425 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 CCDC192P0DO97 292 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 MLH1P40692 756 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 RFC5P40937 340 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 SCNN1GP51170 649 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 NTHL1P78549 312 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 PPP2R5CQ13362 524 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 ZNF423Q2M1K9 1284 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 PLK5Q496M5 336 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 FERMT3Q86UX7 667 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 MAP4K3Q8IVH8 894 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 EXOC8Q8IYI6 725 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 BLIDQ8IZY5 108 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 RNF149Q8NC42 400 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 DAGLBQ8NCG7 672 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 ZFP42Q96MM3 310 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 GPR62Q9BZJ7 368 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 BRD9Q9H8M2 597 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 KCNMB3Q9NPA1 279 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 BMP2KQ9NSY1 1161 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 DDX25Q9UHL0 483 aaKnown RBP13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 RAXQ9Y2V3 346 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 HES2Q9Y543 173 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 PPME1Q9Y570 386 aa13.01□□□□□ -0.33
CACNA1C-228ENST00000492150 PIAS3Q9Y6X2 628 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms