RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 INO80B-WBP1J3KQ70 363 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 B4GALT5O43286 388 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 THPOP40225 353 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 PAFAH1B1P43034 410 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 IFNLR1Q8IU57 520 aaPredicted RBP24.55■■□□□ 1.52
USF3-203ENST00000491165 SLC17A8Q8NDX2 589 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 RIN2Q8WYP3 895 aaPredicted RBP24.55■■□□□ 1.52
USF3-203ENST00000491165 SCLT1Q96NL6 688 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 INO80BQ9C086 356 aaPredicted RBP24.55■■□□□ 1.52
USF3-203ENST00000491165 TMEM134Q9H6X4 195 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 SALL4Q9UJQ4 1053 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 ANKRD63C9JTQ0 380 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 AGPSO00116 658 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 CLIC2O15247 247 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 POU5F1BQ06416 359 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 SFMBT2Q5VUG0 894 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 ZNF410Q86VK4 478 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 HDAC7Q8WUI4 952 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 FZD8Q9H461 694 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 DMGDHQ9UI17 866 aaKnown RBP24.55■■□□□ 1.52
USF3-203ENST00000491165 CDY2AQ9Y6F7 541 aa24.55■■□□□ 1.52
USF3-203ENST00000491165 UBE4BO95155 1302 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 GNA14O95837 355 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 SERPING1P05155 500 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 CXCR5P32302 372 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 MRPS6P82932 125 aaKnown RBP24.54■■□□□ 1.52
USF3-203ENST00000491165 MGAT3Q09327 533 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 ALCAMQ13740 583 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 SNX17Q15036 470 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 AMHR2Q16671 573 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 TRIM60Q495X7 471 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 SRLQ86TD4 932 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 RPAINQ86UA6 219 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 NME8Q8N427 588 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 ZSWIM2Q8NEG5 633 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 ACCSQ96QU6 501 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 PSMB7Q99436 277 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 NLRC4Q9NPP4 1024 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 PCDH10Q9P2E7 1040 aa24.54■■□□□ 1.52
USF3-203ENST00000491165 ADSSP30520 456 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 PHKA2P46019 1235 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 LRRC31Q6UY01 552 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 STXBP4Q6ZWJ1 553 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 ZBTB8OSQ8IWT0 167 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 TARS2Q9BW92 718 aaKnown RBP24.53■■□□□ 1.52
USF3-203ENST00000491165 C11orf49Q9H6J7 331 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 LUC7LQ9NQ29 371 aaKnown RBP24.53■■□□□ 1.52
USF3-203ENST00000491165 TRAF3IP3Q9Y228 551 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 NCK2O43639 380 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 NOL4O94818 638 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 PRKCBP05771 671 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 MATR3P43243 847 aaKnown RBP eCLIP24.53■■□□□ 1.52
USF3-203ENST00000491165 EFNA5P52803 228 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 LRRC26Q2I0M4 334 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 ZNF618Q5T7W0 954 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 SND1Q7KZF4 910 aaKnown RBP eCLIP24.53■■□□□ 1.52
USF3-203ENST00000491165 CDR2LQ86X02 465 aaPredicted RBP24.53■■□□□ 1.52
USF3-203ENST00000491165 SYCP3Q8IZU3 236 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 ZBTB45Q96K62 511 aaPredicted RBP24.53■■□□□ 1.52
USF3-203ENST00000491165 LSM14BQ9BX40 385 aaKnown RBP24.53■■□□□ 1.52
USF3-203ENST00000491165 TLR10Q9BXR5 811 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 CELF4Q9BZC1 486 aaKnown RBP24.53■■□□□ 1.52
USF3-203ENST00000491165 HAPLN2Q9GZV7 340 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 C2orf40Q9H1Z8 148 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 TYW1Q9NV66 732 aaKnown RBP24.53■■□□□ 1.52
USF3-203ENST00000491165 FEZ2Q9UHY8 353 aaPredicted RBP24.53■■□□□ 1.52
USF3-203ENST00000491165 KCNG1Q9UIX4 513 aa24.53■■□□□ 1.52
USF3-203ENST00000491165 RRP15Q9Y3B9 282 aaKnown RBP24.53■■□□□ 1.52
USF3-203ENST00000491165 CKBP12277 381 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 EIF4BP23588 611 aaKnown RBP24.52■■□□□ 1.52
USF3-203ENST00000491165 NAP1L1P55209 391 aaKnown RBP24.52■■□□□ 1.52
USF3-203ENST00000491165 MAPK6Q16659 721 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 KLHDC7AQ5VTJ3 777 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 TRAF7Q6Q0C0 670 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 ANKRD33Q7Z3H0 272 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 UBE2Q1Q7Z7E8 422 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 HVCN1Q96D96 273 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 AGPAT3Q9NRZ7 376 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 STIM2Q9P246 746 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 MYO1CO00159 1063 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 PDXKO00764 312 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 HNRNPDLO14979 420 aaKnown RBP24.52■■□□□ 1.52
USF3-203ENST00000491165 BUB1O43683 1085 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 DARSP14868 501 aaKnown RBP24.52■■□□□ 1.52
USF3-203ENST00000491165 MARSP56192 900 aaKnown RBP24.52■■□□□ 1.52
USF3-203ENST00000491165 FAAP100Q0VG06 881 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 HINFPQ9BQA5 517 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 CBWD1Q9BRT8 395 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 TMEM206Q9H813 350 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 LCMT1Q9UIC8 334 aa24.52■■□□□ 1.52
USF3-203ENST00000491165 ALPK3Q96L96 1907 aa24.51■■□□□ 1.51
USF3-203ENST00000491165 H0YCG3 227 aa24.51■■□□□ 1.51
USF3-203ENST00000491165 EPHB4P54760 987 aa24.51■■□□□ 1.51
USF3-203ENST00000491165 TLE2Q04725 743 aa24.51■■□□□ 1.51
USF3-203ENST00000491165 STRN3Q13033 797 aa24.51■■□□□ 1.51
USF3-203ENST00000491165 C1orf53Q5VUE5 145 aa24.51■■□□□ 1.51
USF3-203ENST00000491165 TRIM59Q8IWR1 403 aa24.51■■□□□ 1.51
USF3-203ENST00000491165 SMARCAL1Q9NZC9 954 aa24.51■■□□□ 1.51
USF3-203ENST00000491165 RNF14Q9UBS8 474 aa24.51■■□□□ 1.51
USF3-203ENST00000491165 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms